Fully sequences genomes

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As of early 2008, there are over 4600 genomes fully sequenced.

List of fully sequenced genomes (please add if you find a missing one)

List from GenomeNewsNetwork

Aeropyrum pernix
           Agrobacterium tumefaciens
Anabaena
Anopheles gambiae
Apis mellifera
Aquifex aeolicus
Arabidopsis thaliana
Archaeoglobus fulgidus
Ashbya gossypii
Bacillus anthracis
Bacillus cereus
Bacillus halodurans
Bacillus licheniformis
Bacillus subtilis
Bacteroides fragilis
Bacteroides thetaiotaomicron
Bartonella henselae
Bartonella quintana
Bdellovibrio bacteriovorus
Bifidobacterium longum
Blochmannia floridanus
Bordetella bronchiseptica
Bordetella parapertussis
Bordetella pertussis
Borrelia burgdorferi
Bradyrhizobium japonicum
Brucella melitensis
Brucella suis
Buchnera aphidicola
Burkholderia mallei
Burkholderia pseudomallei
Caenorhabditis briggsae
Caenorhabditis elegans
Campylobacter jejuni
Candida glabrata
Canis familiaris
Caulobacter crescentus
Chlamydia muridarum
Chlamydia trachomatis
Chlamydophila caviae
Chlamydophila pneumoniae
Chlorobium tepidum
Chromobacterium violaceum
Ciona intestinalis
Clostridium acetobutylicum
Clostridium perfringens
Clostridium tetani
Corynebacterium diphtheriae
Corynebacterium efficiens
Coxiella burnetii
Cryptosporidium hominis
Cryptosporidium parvum
Cyanidioschyzon merolae
Debaryomyces hansenii
Deinococcus radiodurans
Desulfotalea psychrophila
Desulfovibrio vulgaris
Drosophila melanogaster
Encephalitozoon cuniculi
Enterococcus faecalis
Erwinia carotovora
Escherichia coli
Fusobacterium nucleatum
Gallus gallus
           Geobacter sulfurreducens 
Gloeobacter violaceus
Guillardia theta
Haemophilus ducreyi
Haemophilus influenzae
Halobacterium
Helicobacter hepaticus
Helicobacter pylori
Homo sapiens
Kluyveromyces waltii
Lactobacillus johnsonii
Lactobacillus plantarum
Legionella pneumophila
Leifsonia xyli
Lactococcus lactis
Leptospira interrogans
Listeria innocua
Listeria monocytogenes
Magnaporthe grisea
Mannheimia succiniciproducens
Mesoplasma florum
Mesorhizobium loti
Methanobacterium thermoautotrophicum
Methanococcoides burtonii
Methanococcus jannaschii
Methanococcus maripaludis
Methanogenium frigidum
Methanopyrus kandleri
Methanosarcina acetivorans
Methanosarcina mazei
Methylococcus capsulatus
Mus musculus
Mycobacterium bovis
Mycobacterium leprae
Mycobacterium paratuberculosis
Mycobacterium tuberculosis
Mycoplasma gallisepticum
Mycoplasma genitalium
Mycoplasma mycoides
Mycoplasma penetrans
Mycoplasma pneumoniae
Mycoplasma pulmonis
Mycoplasma mobile
Nanoarchaeum equitans
Neisseria meningitidis
Neurospora crassa
Nitrosomonas europaea
Nocardia farcinica
Oceanobacillus iheyensis
Onions yellows phytoplasma
Oryza sativa
Pan troglodytes
Pasteurella multocida
Phanerochaete chrysosporium
Photorhabdus luminescens
Picrophilus torridus
Plasmodium falciparum
Plasmodium yoelii yoelii
Populus trichocarpa
Porphyromonas gingivalis Prochlorococcus marinus
Propionibacterium acnes
Protochlamydia amoebophila
           Pseudomonas aeruginosa
Pseudomonas putida
Pseudomonas syringae
Pyrobaculum aerophilum
Pyrococcus abyssi
Pyrococcus furiosus
Pyrococcus horikoshii
Pyrolobus fumarii
Ralstonia solanacearum
Rattus norvegicus
Rhodopirellula baltica
Rhodopseudomonas palustris
Rickettsia conorii
Rickettsia typhi
Rickettsia prowazekii
Rickettsia sibirica
Saccharomyces cerevisiae
Saccharopolyspora erythraea
Salmonella enterica
Salmonella typhimurium
Schizosaccharomyces pombe
Shewanella oneidensis
Shigella flexneria
Sinorhizobium meliloti
Staphylococcus aureus
Staphylococcus epidermidis
Streptococcus agalactiae
Streptococcus mutans
Streptococcus pneumoniae
Streptococcus pyogenes
Streptococcus thermophilus
Streptomyces avermitilis
Streptomyces coelicolor
Sulfolobus solfataricus
Sulfolobus tokodaii
Synechococcus
Synechocystis
Takifugu rubripes
Tetraodon nigroviridis
Thalassiosira pseudonana
Thermoanaerobacter tengcongensis
Thermoplasma acidophilum
Thermoplasma volcanium
Thermosynechococcus elongatus
Thermotagoa maritima
Thermus thermophilus
Treponema denticola
Treponema pallidum
Tropheryma whipplei
Ureaplasma urealyticum
Vibrio cholerae
Vibrio parahaemolyticus
Vibrio vulnificus
Wigglesworthia glossinidia
Wolbachia pipientis
Wolinella succinogenes
Xanthomonas axonopodis
Xanthomonas campestris
Xylella fastidiosa
Yarrowia lipolytica
Yersinia pseudotuberculosis
Yersinia pestis