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Hak-Min Kim Leopard

77 bytes added, 16:01, 20 August 2019
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<p><span style="font-size:16px"><strong>2. Paper status</strong>: Published (<a href="https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1071-4">Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. </a> <em>Genome biology</em>, 2016)</span></p>
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<li><span style="font-size:16px">Assembly refinement with Moleculo (Gap filling with moleculo)==&gt; It is composed of 6 scripts and plays the role of gap filling using Moleculo. Execute script 0 to 5 sequentially</span></li></ol>
<p ol style="marginlist-left:40.0pt"><span style="font-sizetype:16pxlower-roman">It is composed of 6 scripts and plays the role of gap filling using Moleculo. Execute script 0 to 5 sequentially</span></p<ol> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/0_mapping_moleculo_to_Amurleopard.pl*</span></li> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/1_Covered_N_base_detect.pl*</span></li> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/2_Extract_moleculo_reads_from_N_region.pl*</span></li> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/3_Replace_scaffold_with_moleculo.pl*</span></li> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/4_Substituted_N_count.pl*</span></li> <li><span style="font-size:16px">/BiO/Research/Project1/TGI-AmurLeopard-Genome-2015-03/15.Moleculo_Align_with_substituted_scaffold_BWA/5_Scaffold_finalize.pl*</span></li> </ol> </li>
<li><span style="font-size:16px">Calculation Moleculo length and yield distribution</span>
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