Bureaucrats, Administrators, widgeteditor
1,007
edits
Changes
From kogic.kr
no edit summary
<p> </p>
<p><strong><span style="font-size:16px">4. MethodsRelated script</span></strong></p>
<ol style="list-style-type:upper-alpha">
<li><span style="font-size:16px">Retinoic acid response elements (RAREs) analysis pipeline.</span><br />
<span style="font-size:16px">It is composed of 6 scripts and plays the role of finding RAREs in genome sequence. Execute script 0 to 5 sequentially</span>
<ol style="list-style-type:lower-roman">
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/0_RAREs_motif_finder.pl</span></li>
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/1_RAREs_nearby_gene_within_targetRange.pl</span></li>
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/2_RAREs_nearby_gene_symbol_within_targetRange.pl</span></li>
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/3_Table3_gene_confirm_with_targetRange.pl</span></li>
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/4_Avg.numberWithin10Kgene.pl</span></li>
<li><span style="font-size:16px">/BiO/Share/Kit/Pipeline/Hakmin.Kim/Evolution_Analysis/RetinoicAcidResponseElement/5_NNO_RAREs_distribution_for_figure.pl</span></li>
</ol>
</li>
</ol>
<hr />
<p> </p>
<p><strong><span style="font-size:16px">5. Methods</span></strong></p>
<p> </p>
<ol style="list-style-type:upper-alpha">
<li><span style="font-size:16px">Assembly process</span><br />
<br />
<img alt="" src="/ckfinder/userfiles/images/4_NNO_assembly_process.PNG" style="height:570px; width:962px" /><br />
<br />
</li>
<li><span style="font-size:16px">All methods are described in the method & material section of the published article.</span></li>
</ol>
