Difference between revisions of "KOGIC"

From kogic.kr
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<p><span style="color:#FF0000"><span style="font-size:20px"><strong>KOGIC</strong></span></span></p>
 
  
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<p><span style="font-size:16px"><strong>Ko</strong>rean <strong>G</strong>enom<strong>i</strong>cs <strong>C</strong>enter</span></p>
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== '''KOrean Genomics Center''' ==
  
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<p><span style="font-size:16px">게놈산업기술센터</span></p>
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*Genome & Multi-Omics Data analysis
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*Curing&nbsp;Aging, Cancer, and Chronic Diseases
 +
*Providing&nbsp;Bio Big Data and Bio-Pipelines
  
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<p><span style="font-size:16px">[[유니스트]]의 게놈센터이자, 울산시가 지원하여 설립된 게놈센터입니다.</span></p>
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&nbsp;
  
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<p>&nbsp;</p>
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== '''Introduction: KOrean Genomics Center''' ==
 +
 
 +
*KOGIC is the UNIST genome center established jointly by UNIST and Ulsan City.
 +
*KOGIC Supports genome-based bio and health-care research, development of technologies
 +
*KOGIC is focused on the commercialization of omics technology
 +
 
 +
=== '''Genome Technology Commercialization Core Technology Center''' ===
 +
 
 +
*KOGIC provides Genomic Information Services.&nbsp;
 +
*KOGIC has carried out 10,000 Korean Genome Project and we provide the human genome data along with clinical information.
 +
 
 +
=== '''Partnerships: International Collaboration in Genome-based Biomedical Projects''' ===
 +
 
 +
*Co-founded a personalized genomics project, 10,000 Korean Genome Project&nbsp;with George Church Lab at Harvard Medical School
 +
*KOGIC is a part of the&nbsp;&nbsp;Ulsan Genome Service Industry Regulatory Free Zone with 15 organizations and companies in Korea.
 +
 
 +
&nbsp;
 +
 
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=== '''Genome Industry Hub: The Hub of the Genome Convergence Business''' ===
 +
 
 +
*KOGIC aims to function as the hub for integrated ICT-Bio-AI Industry of Korea.
 +
*KOGIC aims to build and provide core infrastructure for the genome-based biomedical industry of Korea
 +
*KOGIC aims to utilize omics technology to perform genome-to-aging research and development using killifish animal model.
 +
 
 +
<br/> &nbsp;
 +
 
 +
&nbsp;
 +
 
 +
== '''History of KOGIC''' ==
 +
 
 +
{| border="1" cellpadding="1" cellspacing="1"
 +
|-
 +
| '''Years'''
 +
| '''Achievements'''
 +
|-
 +
| 2014
 +
|
 +
*Established UNIST Genome Institute
 +
*Launching the Korean Genome Project
 +
*Established the Korean Standardized Genome Center
 +
 
 +
|-
 +
| 2015
 +
|
 +
*Declaration of Ulsan 10K Genome Project
 +
*Hosted the 1st Genome Korea Conference
 +
 
 +
|-
 +
| 2016
 +
|
 +
*Acquiring funding from the&nbsp;Committee of Regional Development Lead Project
 +
*Hosted the 2nd Genome Korea Conference
 +
 
 +
|-
 +
| 2017
 +
|
 +
*UNIST Genome center upgraded to the KOrean Genomics Center
 +
*Hosted the 3rd Genome Korea Conference
 +
 
 +
|-
 +
| 2018
 +
|
 +
*Hosted the world’s first Genome Expo 2018
 +
 
 +
|-
 +
| 2019
 +
|
 +
*Hosted Genome Symposium between UNIST and Pyongyang University of Science and Technology
 +
*Hosted Genome Expo 2019
 +
 
 +
|-
 +
| 2020
 +
| Conducted a genomic analysis project for&nbsp;infectious diseases
 +
|-
 +
| 2021
 +
|
 +
*Designated as a Genome Service Industry Regulation-Free Special Zone participant
 +
*Completed the sequencing of the 10,000 Korean genome
 +
*End of the Ulsan 10K Project
 +
 
 +
|}
 +
 
 +
<br/> &nbsp;
 +
 
 +
== '''Major Research Accomplishments''' ==
 +
 
 +
*Implemented the largest-scale Korean Genome Project of 10,000 healthy and patient&nbsp;genomes.
 +
*The construction of the Korean Standard Genome (KOREF) and Korean Standard Variome (KoVariome)
 +
*Publication of the reference genomes of whale sharks, raptors, jellyfish, and owls.
 +
*The publication of 1,074 Korean&nbsp;genomes.
 +
 
 +
<br/> 2015: The First Korean Vulture Genome Sequencing<br/> 2016: The First Leopard Reference Genome, Korean Standard Reference Genome(KOREF)<br/> 2017: The First Korean Bat Genome Sequencing, The First Neolithic East Asian Ancient Genome Sequencing<br/> 2018: KoVariome: Korean Population Variome<br/> 2019: The First Jellyfish Genome Sequencing<br/> 2020: Korea 1K Genome Project<br/> 2021: Sequencing of 10,000 Korean Genome<br/> 2022: Reconstruct Ancient Korean Faces through Genetic Analysis<br/> <br/> &nbsp;
 +
 
 +
== '''Laboratory Resources''' ==
 +
 
 +
=== '''[http://in.genomelab.org/KOGIC_Server_list Super Computing System] for Genome Analysis''' ===
 +
 
 +
*CPU&nbsp;: 4,472 cores
 +
*GPU&nbsp;: 96 cores, 29,952 CUDAs
 +
*Memory&nbsp;: 43,216 GB (42.2 TB)
 +
*Storage&nbsp;: 13,853 TB (13.53 PB)'
 +
 
 +
&nbsp; &nbsp;
 +
 
 +
&nbsp;
 +
 
 +
=== '''Bio Big Data and Sample Availability''' ===
 +
 
 +
*More than 10,000* human genome data
 +
*10,336 Whole Genomes, 774 Methyl-seqs, 1,063 RNA-seqs, 132 ATAC-seqs
 +
*10,940* Large-scale samples in total
 +
*Blood samples: 4,313, DNA 3,816, Buffy coat 1,505, RNA 1000, PBMC 162, Plasma 100, Tissue 44
 +
 
 +
<br/> <br/> '''References'''
 +
 
 +
*[https://in.genomelab.org/upload/20230405192325_kogic_leaflet_text_to_path.ai kogic_leaflet_text_to_path.ai]&nbsp;made by Yoonsung in 2023
 +
*[https://in.genomelab.org/upload/20230427144945_Genomelab_신입생용_홍보_포스터_20230419.pptx Genomelab_신입생용_홍보_포스터_20230419.pptx]
 +
*[https://in.genomelab.org/upload/20230302230127_kogic_leaflet.docx kogic_leaflet.docx]
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*[https://in.genomelab.org/upload/20230302225739_2020_Bhak_genomics_20200630_updated_SW.pptx 2020_Bhak_genomics_20200630_updated_SW.pptx]&nbsp;made by Sungwon in 2020
 +
 
 +
&nbsp;

Revision as of 19:05, 17 November 2023

KOrean Genomics Center

  • Genome & Multi-Omics Data analysis
  • Curing Aging, Cancer, and Chronic Diseases
  • Providing Bio Big Data and Bio-Pipelines

 

Introduction: KOrean Genomics Center

  • KOGIC is the UNIST genome center established jointly by UNIST and Ulsan City.
  • KOGIC Supports genome-based bio and health-care research, development of technologies
  • KOGIC is focused on the commercialization of omics technology

Genome Technology Commercialization Core Technology Center

  • KOGIC provides Genomic Information Services. 
  • KOGIC has carried out 10,000 Korean Genome Project and we provide the human genome data along with clinical information.

Partnerships: International Collaboration in Genome-based Biomedical Projects

  • Co-founded a personalized genomics project, 10,000 Korean Genome Project with George Church Lab at Harvard Medical School
  • KOGIC is a part of the  Ulsan Genome Service Industry Regulatory Free Zone with 15 organizations and companies in Korea.

 

Genome Industry Hub: The Hub of the Genome Convergence Business

  • KOGIC aims to function as the hub for integrated ICT-Bio-AI Industry of Korea.
  • KOGIC aims to build and provide core infrastructure for the genome-based biomedical industry of Korea
  • KOGIC aims to utilize omics technology to perform genome-to-aging research and development using killifish animal model.


 

 

History of KOGIC

Years Achievements
2014
  • Established UNIST Genome Institute
  • Launching the Korean Genome Project
  • Established the Korean Standardized Genome Center
2015
  • Declaration of Ulsan 10K Genome Project
  • Hosted the 1st Genome Korea Conference
2016
  • Acquiring funding from the Committee of Regional Development Lead Project
  • Hosted the 2nd Genome Korea Conference
2017
  • UNIST Genome center upgraded to the KOrean Genomics Center
  • Hosted the 3rd Genome Korea Conference
2018
  • Hosted the world’s first Genome Expo 2018
2019
  • Hosted Genome Symposium between UNIST and Pyongyang University of Science and Technology
  • Hosted Genome Expo 2019
2020 Conducted a genomic analysis project for infectious diseases
2021
  • Designated as a Genome Service Industry Regulation-Free Special Zone participant
  • Completed the sequencing of the 10,000 Korean genome
  • End of the Ulsan 10K Project


 

Major Research Accomplishments

  • Implemented the largest-scale Korean Genome Project of 10,000 healthy and patient genomes.
  • The construction of the Korean Standard Genome (KOREF) and Korean Standard Variome (KoVariome)
  • Publication of the reference genomes of whale sharks, raptors, jellyfish, and owls.
  • The publication of 1,074 Korean genomes.


2015: The First Korean Vulture Genome Sequencing
2016: The First Leopard Reference Genome, Korean Standard Reference Genome(KOREF)
2017: The First Korean Bat Genome Sequencing, The First Neolithic East Asian Ancient Genome Sequencing
2018: KoVariome: Korean Population Variome
2019: The First Jellyfish Genome Sequencing
2020: Korea 1K Genome Project
2021: Sequencing of 10,000 Korean Genome
2022: Reconstruct Ancient Korean Faces through Genetic Analysis

 

Laboratory Resources

Super Computing System for Genome Analysis

  • CPU : 4,472 cores
  • GPU : 96 cores, 29,952 CUDAs
  • Memory : 43,216 GB (42.2 TB)
  • Storage : 13,853 TB (13.53 PB)'

   

 

Bio Big Data and Sample Availability

  • More than 10,000* human genome data
  • 10,336 Whole Genomes, 774 Methyl-seqs, 1,063 RNA-seqs, 132 ATAC-seqs
  • 10,940* Large-scale samples in total
  • Blood samples: 4,313, DNA 3,816, Buffy coat 1,505, RNA 1000, PBMC 162, Plasma 100, Tissue 44



References

 

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