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김학민

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[[FileHak-Min kim<br/> <br/> <span style="font-size:|214x191px]]16px">'''<u>Education and training</u>'''</span>
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<p style="text-align:justify"><span style="font-size:16px">&nbsp;'''<u>Education and training</u>'''</span></p>
<span style="font-family:arial">&nbsp;2015-2019.8</span><span style="font-family:arial">&nbsp;</span><span style="font-family:arial">&nbsp; &nbsp; &nbsp;&nbsp;&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;&nbsp;Ph.D course, UNIST</span>
<span style="font-family:arial">&nbsp;2003-2009&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; B</span><span style="font-family:arial">.S</span><span style="font-family:arial">&nbsp;in Bioinformatics,&nbsp;</span><span style="font-family:arial">&nbsp;Sangmyung University</span>
<p style="text-align:justify">&nbsp;<span style="font-family:arial">&nbsp;&nbsp;&nbsp;</span></p> <p style="text-align:justify"><span style="font-size:16px">'''<u><span style="font-family:arial,sans-serif">Professional Experiences</span></u>'''</span></p> <p style="text-align:justify"><span style="font-family:arial">2009.02-~ 2010.01</span><span style="font-family:arial">&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Researcher, Korean Bioinformation Center (KOBIC), KRIBB,&nbsp;</span><span style="font-family:arial,sans-serif">Daejeon, Korea</span><br/p> <span style="font-family:arial">2011.02-~ 2014.07</span><span style="font-family:arial">&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Senior Researcher,&nbsp;</span><span style="font-family:arial,sans-serif">Personal Genomics Institute, Genome Research Foundation, Suwon, Korea</span><p style="text-align:justify"br/><span style="font-family:arial">2014.07-~ 2015.08 &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;</span><span style="font-family:arial">Researcher</span><span style="font-family:arial">, The Genomics Institute, Ulsan, Korea<br/span></p> <p style="text-align:justify"><span style="font-family:arial">2019.10-present~ 2021.08&nbsp;&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Senior Researcher,&nbsp;Clinomics, Suwon, Korea<br/> 2021.10 ~ present&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;&nbsp;</span>Principal Researcher, Procagen, Seongnam, Korea</p>
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<p style="text-align:justify"><span style="font-size:16px"><span style="font-family:arial,helvetica,sans-serif">'''<u>List of Publications</u>'''</span></span></p>
'''2729. (co-First author)''' Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome Project: 1094 Korean personal genomes with clinical informationMGI and Illumina sequencing benchmark for whole-genome sequencing.<br/> '''Hak-Min Kim''', Sungwon Jeon, Youngjune BhakOksung Chung, Yeonsong ChoiJe Hoon Jun, Yeonsu Jeon, Seunghoon Hui-Su Kim, Jaeyoung Jang, Jinho Jang, Asta Blazyte, Changjae KimHwang-Yeol Lee, Yeonkyung Kim, Jungae Shim, Nayeong Kim, Yeo Jin Kim, Seung Gu Park, Jungeun KimYoungseok Yu, Yun Sung Cho, Yeshin Park, Hak-Min Kim, Byoung-Chul Kim, Neung-Hwa Park, Eun-Seok Shin, Byung Chul Kim, Dan M Bolser, Andrea Manica, Jeremy S. Edwards, George Church, Semin Lee,&nbsp;and Jong Bhak.&nbsp;'''GigaScience&nbsp;''Science advances''. 6:eaaz7835'''&nbsp;(20202021.<br/> <br/> '''2628. (co-author)''' Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian LongevityThe whale shark genome reveals how genomic and physiological properties scale with body size.<br/> Jessica ALee H, Kim J, Weber JA, Chung OSeung Gu Park, Cho YSVictor Luria, Jho S, Jun JSungwon Jeon, '''Hak-Min Kim HM''', Lim J, Choi JP, Yeonsu Jeon S, Blazyte AYoungjune Bhak, Edwards JSJe Hun Jun, Paek WKSang Wha Kim, Bhak J. '''''Mol Cells''. 10.14348/molcells.2019.0190.'''&nbsp;(2020) &nbsp; '''25. (co-author)&nbsp;'''Depression and suicide risk prediction models using blood-derived multi-omics data Youngjune BhakWon Hee Hong, Hyoung-oh JeongSemin Lee, Yun Sung Cho, Sungwon JeonAmir Karger, Juok Cho&nbsp;John W. Cain, Jeong-An GimAndrea Manica, Yeonsu Jeon, Asta Blazyte, Seung Gu Park, '''Hak-Min Soonok Kim''', EunJae-Seok Shin, Jong-Woo Paik, Hae-Woo Lee, Wooyoung Kang, Aram Hoon Kim, Yumi Kim, Byung Chul Kim, Byung-Joo HamJeremy S. Edwards, Jong Bhak & Semin Lee&nbsp;'''', and George M. Church. 'Translational Psychiatry'' volume 9, Article number: 262PNAS ''' (20192020)&nbsp;<br/> &nbsp; <br/> '''2427. (co-author)&nbsp;'''Raptor Korean Genome Project: 1094 Korean personal genomes reveal evolutionary signatures of predatory and nocturnal lifestyles. Yun Sung Chowith clinical information<br/> Sungwon Jeon, Youngjune Bhak, Yeonsong Choi, Yeonsu Jeon, Seunghoon Kim, Jaeyoung Jang, Jinho Jang, Asta Blazyte, Je Hoon JunChangjae Kim, Jung A Yeonkyung Kim, '''Hak-Min Jungae Shim, Nayeong Kim''', Oksung ChungYeo Jin Kim, Seung-Gu KangPark, Jin-Young Jungeun Kim, Yun Sung Cho, Yeshin Park, HwaHak-Jung Min Kim, Sunghyun Kim, HeeByoung-Jong Chul Kim, JinNeung-ho JangHwa Park, KiEun-Jeong NaSeok Shin, Jeongho Byung Chul Kim, Seung Gu Park, Hwang-Yeol LeeDan Bolser, Andrea Manica, David P. Mindell,11 Jérôme Fuchs, Jeremy S. Edwards, Jessica A. WeberGeorge Church, Christopher C. Witt, Joo-Hong Yeo, Soonok KimSemin Lee, &nbsp;and Jong Bhak .&nbsp;'''''Genome BiologyScience advances'' 20. 6:181eaaz7835''' &nbsp;(20192020)
'''2326. (co-first author)''' Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity.<br/> Lee H, Kim J, Weber JA, Chung O, Cho YS, Jho S, Jun J, '''Kim HM''', Lim J, Choi JP, Jeon S, Blazyte A, Edwards JS, Paek WK, Bhak J. '''''Mol Cells''. 10.14348/molcells.2019.0190.'''&nbsp;The genome (2020)<br/> <br/> '''25. (co-author)&nbsp;'''Depression and suicide risk prediction models using blood-derived multi-omics data<br/> Youngjune Bhak, Hyoung-oh Jeong, Yun Sung Cho, Sungwon Jeon, Juok Cho, Jeong-An Gim, Yeonsu Jeon, Asta Blazyte, Seung Gu Park, '''Hak-Min Kim''', Eun-Seok Shin, Jong-Woo Paik, Hae-Woo Lee, Wooyoung Kang, Aram Kim, Yumi Kim, Byung Chul Kim, Byung-Joo Ham, Jong Bhak & Semin Lee&nbsp;'''''Translational Psychiatry'' volume 9, Article number: 262''' (2019)&nbsp;<br/> <br/> '''24. (co-author)&nbsp;'''Raptor genomes reveal evolutionary signatures of the giant Nomurapredatory and nocturnal lifestyles.<br/> Yun Sung Cho, Je Hoon Jun, Jung A Kim, '''Hak-Min Kim'''s jellyfish sheds light on the early evolution of active predation, Oksung Chung, Seung-Gu Kang, Jin-Young Park, Hwa-Jung Kim, Sunghyun Kim, Hee-Jong Kim, Jin-ho Jang, Ki-Jeong Na, Jeongho Kim, Seung Gu Park, Hwang-Yeol Lee, Andrea Manica, David P. Mindell,11 Jérôme Fuchs, Jeremy S. Edwards, Jessica A. Weber, Christopher C.Witt, Joo-Hong Yeo, Soonok Kim, and Jong Bhak '''''Genome Biology'' 20:181''' (2019)
<br/> '''23. (co-first author)'''&nbsp;The genome of the giant Nomura's jellyfish sheds light on the early evolution of active predation.<br/> '''Hak-Min Kim''', Jessica A. Weber, Nayoung Lee, Seung Gu Park, Yun Sung Cho, Youngjune Bhak, Nayun Lee, Yeonsu Jeon, Sungwon Jeon, Victor Luria, Amir Karger, Marc W. Kirschner, Ye Jin Jo, Seonock Woo, Kyoungsoon Shin, Oksung Chung, Jae-Chun Ryu, Hyung-Soon Yim, Jung-Hyun Lee, Jeremy S. Edwards, Andrea Manica, Jong Bhak, and Seungshic Yum '''''BMC Biology''&nbsp;17:28&nbsp;'''(2019). &nbsp;<p style="text-align:justify"br/> <br/>'''22. (co-author)'''&nbsp;The draft genome of an octocoral, Dendronephthya gigantea&nbsp;<br/> Yeonsu Jeon, Seung Gu Park, Nayun Lee, Jessica A Weber, Hui-Su Kim, Sung-Jin Hwang, Seonock Woo, '''Hak-min Kim''', Youngjune Bhak, Sungwon Jeon, Nayoung Lee, Yejin Jo, Asta Blazyte, Taewoo Ryu, Yun Sung Cho, Hyunho Kim, Jung-Hyun Lee, Hyung-Soon Yim, Jong Bhak, and Seungshic Yum&nbsp;'''''Genome Biol Evol.''&nbsp;pii:evz043&nbsp;'''(2019).</p> <p style="text-align:justify">&nbsp;</p> <p style="text-align:justify">'''21. (co-author)'''&nbsp;The Galleria mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax<br/> Hyun Gi Kong, Hyun Ho Kim, Joon-hui Chung, JeHoon Jun, Soohyun Lee, '''Hak-Min Kim''', Sungwon Jeon, Seung Gu Park, Jong Bhak, Choong-Min Ryu&nbsp;'''''Cell Rep.''&nbsp;26:2451-2464&nbsp;'''(2019).</p> <p style="text-align:justify">&nbsp;</p> <p style="text-align:justify">'''20. (co-author)'''&nbsp;KoVariome: Korean National Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses<br/> Jungeun Kim, Jessica A. Weber, Sungwoong Jho, Jinho Jang, JeHoon Jun, Yun Sung Cho, '''Hak-Min Kim''', Hyunho Kim, Yumi Kim, OkSung Chung, Chang Geun Kim, HyeJin Lee, Byung Chul Kim, Kyudong Han, InSong Koh, Kyun Shik Chae, Semin Lee, Jeremy S. Edwards, and Jong Bhak&nbsp;'''''Sci Rep.''&nbsp;8:5677&nbsp;'''(2018).</p> <p style="text-align:justify">&nbsp;</p>
'''19. (co-author)'''&nbsp;Myotis rufoniger genome sequence and analyses: M. rufoniger’s genomic feature and the decreasing effective population size of Myotis bats<br/> Youngjune Bhak, Yeonsu Jeon, Sungwon Jeon, Oksung Chung, Sungwoong Jho, JeHoon Jun, '''Hak-Min Kim''', Yongsoo Cho, Changhan Yoon, Seungwoo Lee, Jung-Hoon Kang, Jong-Deock Lim, Junghwa An, Yun Sung Cho, Doug-Young Ryu, and Jong Bhak&nbsp;'''''PLoS One''&nbsp;12:e0180418&nbsp;'''(2017).
<p style="text-align:justify">&nbsp;</p> <p style="text-align:justify">'''18. (co-author)'''&nbsp;Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago</p>
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