Difference between revisions of "전성원"

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<p>&nbsp;<img alt="" src="/ckfinder/userfiles/images/%EC%A6%9D%EB%AA%85%EC%82%AC%EC%A7%84_20150924(1).jpg" style="height:174px; width:151px" /></p>
 
  
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<p>Sungwon Jeon</p>
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&nbsp;<img style="null" src=http://kogic.kr/ckfinder/userfiles/images/%E1%84%8C%E1%85%B3%E1%86%BC%E1%84%86%E1%85%A7%E1%86%BC%E1%84%89%E1%85%A1%E1%84%8C%E1%85%B5%E1%86%AB.jpg>
  
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<p><strong>Education</strong></p>
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Sungwon Jeon
  
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<ul>
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'''Education'''
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<li>2016.3 - present : M.S&nbsp;and Ph.D&nbsp;combined course in Bio Medical Engineering, UNIST, Ulsan, Korea</li>
 
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<li>2012.3 - 2016.2 : B.S. in Bio Medical Science ,UNIST, Ulsan, Korea</li>
 
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<li>2012.3 - 2016.2 : B.S. in Computer Science and Engineering&nbsp;,UNIST, Ulsan, Korea (Multidisciplinary major)</li>
 
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</ul>
 
  
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<p><strong>Career</strong></p>
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*2016.3 - 2021.08 : Ph. D. in Biomedical Engineering, UNIST, Ulsan, Korea (Dissertation: Korean Genome Analysis; Advisor: Jong Bhak)
 +
*2012.3 - 2016.2&nbsp;: B.S. in Bio Medical Science ,UNIST, Ulsan, Korea
 +
*2012.3 - 2016.2&nbsp;: B.S. in Computer Science and Engineering&nbsp;,UNIST, Ulsan, Korea (Multidisciplinary major)
  
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<ul>
+
'''Career'''
−
<li>2018.12 - present : Researcher, KOGIC, UNIST, Ulsan, Korea (Military service)</li>
 
−
<li>2016.3 - present : Graduate Researcher, TGI, UNIST, Ulsan, Korea</li>
 
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<li>2014.9 - 2016.2&nbsp;: Undergrad. Researcher, The Genomics Institute, UNIST, Ulsan, Korea</li>
 
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</ul>
 
  
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<p><strong>Research Area</strong></p>
+
*2018.12 - present&nbsp;: Researcher, KOGIC, UNIST, Ulsan, Korea (Military service)
 +
*2016.3 - 2021.08 : Graduate Researcher, TGI, UNIST, Ulsan, Korea
 +
*2014.9 - 2016.2&nbsp;: Undergrad. Researcher, The Genomics Institute, UNIST, Ulsan, Korea
  
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<ul>
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'''Research Area'''
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<li>Bioinformatics</li>
 
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<li>Genome Assembly Analysis</li>
 
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<li>Comparative Genomics</li>
 
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</ul>
 
  
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<p><strong>List of Publication</strong></p>
+
*Bioinformatics
 +
*Genome Assembly Analysis
 +
*Comparative Genomics
  
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<p><strong>12)&nbsp;Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity</strong></p>
+
'''List of Publication'''
  
−
<p>HyeJin Lee, Jungeun Kim, Jessica A Weber, Oksung Chung, Yun Sung Cho, Sungwoong Jho, JeHoon Jun, Hak-Min Kim, Jeongheui Lim, Jae-Pil Choi, <strong>Sungwon Jeon</strong>, Asta Blazyte, Jeremy S Edwards, Woon Kee Paek, Jong Bhak</p>
+
'''21)&nbsp;Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome: MGI and Illumina sequencing benchmark for whole-genome sequencing'''<br/> Hak-Min Kim,&nbsp;'''Sungwon Jeon''', Oksung Chung, Je Hoon Jun, Hui-Su Kim, Asta Blazyte, Hwang-Yeol Lee, Youngseok Yu, Yun Sung Cho, Dan M Bolser, Jong Bhak<br/> ''Giga Science. 2021.''<br/> <br/> '''20) Welfare Genome Project: A Participatory Korean Personal Genome Project With Free Health Check-Up and Genetic Report Followed by Counseling (Co-first author)'''<br/> Yeonsu Jeon, '''Sungwon Jeon''', Asta Blazyte, Yeo Jin Kim, Jasmin Junseo Lee, Youngjune Bhak, Yun Sung Cho, Yeshin Park, Eui-Kyu Noh, Andrea Manica, Jeremy S. Edwards, Dan Bolser, Sukyeon Kim, Yuji Lee, Changhan Yoon, Semin Lee, Byung Chul Kim, Neung Hwa Park,&nbsp;and Jong Bhak<br/> ''Frontiers in Genetics. 2021.''<br/> <br/> '''19)&nbsp;Polygenic risk score validation using Korean genomes of 265 early-onset acute myocardial infarction patients and 636 healthy controls (Co-first author)'''<br/> Youngjune Bhak, Yeonsu Jeon, '''Sungwon Jeon,''' Changhan Yoon, Min Kim, Asta Blazyte, Yeonkyung Kim, Younghui Kang, Changjae Kim, Sang Yeub Lee, Jang-Whan Bae, Weon Kim, Yeo Jin Kim, Jungae Shim, Nayeong Kim, Sung Chun, Byoung-Chul Kim, Byung Chul Kim, Semin Lee, Jong Bhak, Eun-Seok Shin<br/> ''Plos One. 2021.''<br/> <br/> '''18)&nbsp;Complete genome sequence and bioinformatics analysis of nine Egyptian females with clinical information from different geographic regions in Egypt'''<br/> Mahmoud ElHefnawi, Elsayed Hegazy,&nbsp;Asmaa Elfiky, Yeonsu Jeon,&nbsp;'''Sungwon Jeon''',&nbsp;Jong Bhak, Fateheya Mohamed Metwally, Sumio Sugano, Terumi Horiuchi,&nbsp;Abe Kazumi,&nbsp;Asta Blazyte<br/> ''Gene.'' 2020<br/> <br/> '''17)&nbsp;Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, ''Homotherium latidens'''''<br/> RossBarnett, Michael V.Westbury, MarcelaSandoval-Velasco, Filipe GarrettVieira, '''SungwonJeon''', GrantZazula, Michael D.Martin, Simon Y.W.Ho, NiklasMather, ShyamGopalakrishnan, JazmínRamos-Madrigal, Marcde Manuel, M. LisandraZepeda-Mendoza, AgostinhoAntunes, Aldo CarmonaBaez, BiniaDe Cahsan, GregerLarson, Stephen J.O’Brien, EduardoEizirik, Warren E.Johnson, Klaus-PeterKoepfli, AndreasWilting, JörnsFickel, LoveDalén, Eline D.Lorenzen17TomasMarques-Bonet, Anders J.Hansen, GuojieZhang, JongBhak, NobuyukiYamaguchi, M. Thomas P.Gilbert<br/> ''Current Biology''. 2020.<br/> <br/> '''16) The whale shark genome reveals how genomic and physiological properties scale with body size'''<br/> Jessica A. Weber, Seung Gu Park, Victor Luria, '''Sungwon Jeon''', &nbsp;Hak-Min Kim, Yeonsu Jeon, &nbsp;Youngjune Bhak, &nbsp;Je Hun Jun, Sang Wha Kim, Won Hee Hong, &nbsp;Semin Lee, &nbsp;Yun Sung Cho, Amir Karger, &nbsp;John W. Cain, &nbsp;Andrea Manica, Soonok Kim, Jae-Hoon Kim, Jeremy S. Edwards, Jong Bhak, and &nbsp;George M. Church<br/> ''PNAS.'' 2020.<br/> <br/> '''15)&nbsp;Korean Genome Project: 1094 Korean personal genomes with clinical information (First author)<br/> Sungwon Jeon, '''Youngjune Bhak, Yeonsong Choi, Yeonsu Jeon, Seunghoon Kim, Jaeyoung Jang, Jinho Jang, Asta Blazyte, Changjae Kim, Yeonkyung Kim, Jungae Shim, Nayeong Kim, Yeo Jin Kim, Seung Gu Park, Jungeun Kim, Yun Sung Cho, Yeshin Park, Hak-Min Kim, Byoung-Chul Kim, Neung-Hwa Park, Eun-Seok Shin, Byung Chul Kim, Dan Bolser, Andrea Manica, Jeremy S. Edwards, George Church, Semin Lee, Jong Bhak<br/> ''Science Advances''. 2020.<br/> <br/> '''14)&nbsp;The origin and composition of Korean ethnicity analyzed by ancient and present-day genome sequences'''&nbsp;'''(Co-first author)'''
  
−
<p>Molecules and Cells. 2020.</p>
+
Jungeun Kim,&nbsp;'''Sungwon Jeon''', Jae-Pil Choi, Asta Blazyte, Yeonsu Jeon, Jong-Il Kim, Jun Ohashi, Katsushi Tokunaga, Sumio Sugano, Suthat Fucharoen, Fahd Al-Mulla, Jong Bhak
  
−
<p><strong>11)&nbsp;Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information&nbsp;</strong><br />
+
''Genome Biology and Evolution''. 2020.
−
Hui-Su Kim, <strong>Sungwon Jeon</strong>, Changjae Kim, Yeon Kyung Kim, Yun Sung Cho, Jungeun Kim, Asta Blazyte, Andrea Manica, Semin Lee, Jong Bhak</p>
 
  
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<p><em>Giga Science</em>. 2019.</p>
+
<br/> '''13)&nbsp;Decoding a highly mixed Kazakh genome (Co-first author)'''
  
−
<p><strong>10)&nbsp;Depression and suicide risk prediction models using blood-derived multi-omics data</strong></p>
+
Madina Seidualy, Asta Blazyte, '''Sungwon Jeon''', Youngjune Bhak, Yeonsu Jeon, Jungeun Kim, Anders Eriksson, Dan Bolser, Changhan Yoon, Andrea Manica, Semin Lee & Jong Bhak&nbsp;
  
−
<p>Youngjune Bhak, Hyoung-oh Jeong, Yun Sung Cho, <strong>Sungwon Jeon</strong>, Juok Cho, Jeong-An Gim, Yeonsu Jeon, Asta Blazyte, Seung Gu Park, Hak-Min Kim, Eun-Seok Shin, Jong-Woo Paik, Hae-Woo Lee, Wooyoung Kang, Aram Kim, Yumi Kim, Byung Chul Kim, Byung-Joo Ham, Jong Bhak, Semin Lee</p>
+
Human Genetics. 2020.
  
−
<p><em>Translational Psychiatry</em>. 2019.</p>
+
'''12)&nbsp;Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity'''
  
−
<p><strong>9) The draft genome of an octocoral, Dendronephthya </strong><strong>gigantea</strong><strong>&nbsp;</strong><br />
+
HyeJin Lee, Jungeun Kim, Jessica A Weber, Oksung Chung, Yun Sung Cho, Sungwoong Jho, JeHoon Jun, Hak-Min Kim, Jeongheui Lim, Jae-Pil Choi, '''Sungwon Jeon''', Asta Blazyte, Jeremy S Edwards, Woon Kee Paek, Jong Bhak
−
Yeonsu Jeon, Seung Gu Park, Nayun Lee, Jessica A Weber, Hui-Su Kim, Sung-Jin Hwang, Seonock Woo,&nbsp;Hak-min Kim, Youngjune Bhak, <strong>Sungwon Jeon</strong>, Nayoung Lee, Yejin Jo, Asta Blazyte, Taewoo Ryu, Yun Sung Cho, Hyunho Kim, Jung-Hyun Lee, Hyung-Soon Yim, Jong Bhak, and Seungshic Yum</p>
 
  
−
<p><em>Genome Biol Evol.&nbsp;</em><em>2019.</em></p>
+
Molecules and Cells. 2020.
  
−
<p><strong>8)&nbsp;The genome of the giant Nomura&rsquo;s jellyfish sheds light on the early evolution of active predation</strong></p>
+
'''11)&nbsp;Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information&nbsp;'''<br/> Hui-Su Kim, '''Sungwon Jeon''', Changjae Kim, Yeon Kyung Kim, Yun Sung Cho, Jungeun Kim, Asta Blazyte, Andrea Manica, Semin Lee, Jong Bhak
  
−
<p>Hak-Min&nbsp;Kim, Jessica&nbsp;A.&nbsp;Weber, Nayoung&nbsp;Lee, Seung&nbsp;Gu&nbsp;Park, Yun&nbsp;Sung&nbsp;Cho, Youngjune&nbsp;Bhak, Nayun&nbsp;Lee, Yeonsu&nbsp;Jeon,&nbsp;<strong>Sungwon</strong><strong>Jeon</strong>, Victor&nbsp;Luria, Amir&nbsp;Karger, Marc&nbsp;W.&nbsp;Kirschner, Ye&nbsp;Jin&nbsp;Jo, Seonock&nbsp;Woo, Kyoungsoon&nbsp;Shin,&nbsp; Oksung&nbsp;Chung, Jae-Chun&nbsp;Ryu, Hyung-Soon&nbsp;Yim, Jung-Hyun&nbsp;Lee, Jeremy&nbsp;S.&nbsp;Edwards, Andrea&nbsp;Manica, Jong&nbsp;Bhak&nbsp;and Seungshic&nbsp;Yum</p>
+
''Giga Science''. 2019.
  
−
<p><em>BMC Biology. 2019.</em></p>
+
'''10)&nbsp;Depression and suicide risk prediction models using blood-derived multi-omics data'''
  
−
<p><strong>7)&nbsp;The Galleria mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax</strong></p>
+
Youngjune Bhak, Hyoung-oh Jeong, Yun Sung Cho, '''Sungwon Jeon''', Juok Cho, Jeong-An Gim, Yeonsu Jeon, Asta Blazyte, Seung Gu Park, Hak-Min Kim, Eun-Seok Shin, Jong-Woo Paik, Hae-Woo Lee, Wooyoung Kang, Aram Kim, Yumi Kim, Byung Chul Kim, Byung-Joo Ham, Jong Bhak, Semin Lee
  
−
<p>Kong, Hyun Gi, Hyun Ho Kim, Joon-hui Chung, JeHoon Jun, Soohyun Lee, Hak-Min Kim, <strong>Sungwon Jeon</strong>, Seung Gu Park, Jong Bhak, and Choong-Min Ryu</p>
+
''Translational Psychiatry''. 2019.
  
−
<p><em>Cell Reports</em>, 2019</p>
+
'''9) The draft genome of an octocoral, Dendronephthya ''''''gigantea''''''&nbsp;'''<br/> Yeonsu Jeon, Seung Gu Park, Nayun Lee, Jessica A Weber, Hui-Su Kim, Sung-Jin Hwang, Seonock Woo,&nbsp;Hak-min Kim, Youngjune Bhak, '''Sungwon Jeon''', Nayoung Lee, Yejin Jo, Asta Blazyte, Taewoo Ryu, Yun Sung Cho, Hyunho Kim, Jung-Hyun Lee, Hyung-Soon Yim, Jong Bhak, and Seungshic Yum
  
−
<p><strong>6) Whole genome sequencing and bioinformatics analysis of two Egyptian genomes</strong>&nbsp;(Co-first Author)</p>
+
''Genome Biol Evol.&nbsp;''''2019.'''''
  
−
<p>Mahmoud ElHefnawi,&nbsp;<strong>Sungwon Jeon</strong>, Youngjune Bhak, Asmaa ElFiky, Ahmed Horaiz, JeHoon Jun, Hyunho Kim, Jong Bhak</p>
+
'''8)&nbsp;The genome of the giant Nomura’s jellyfish sheds light on the early evolution of active predation'''
  
−
<p>Gene, 2018</p>
+
Hak-Min&nbsp;Kim, Jessica&nbsp;A.&nbsp;Weber, Nayoung&nbsp;Lee, Seung&nbsp;Gu&nbsp;Park, Yun&nbsp;Sung&nbsp;Cho, Youngjune&nbsp;Bhak, Nayun&nbsp;Lee, Yeonsu&nbsp;Jeon,&nbsp;'''Sungwon&nbsp;Jeon''', Victor&nbsp;Luria, Amir&nbsp;Karger, Marc&nbsp;W.&nbsp;Kirschner, Ye&nbsp;Jin&nbsp;Jo, Seonock&nbsp;Woo, Kyoungsoon&nbsp;Shin,&nbsp; Oksung&nbsp;Chung, Jae-Chun&nbsp;Ryu, Hyung-Soon&nbsp;Yim, Jung-Hyun&nbsp;Lee, Jeremy&nbsp;S.&nbsp;Edwards, Andrea&nbsp;Manica, Jong&nbsp;Bhak&nbsp;and Seungshic&nbsp;Yum
  
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<p>5)&nbsp;<strong>Sequencing and analysis of the whole genome of Indian Gujarati male.</strong></p>
+
''BMC Biology. 2019.''
  
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<p>Suhani Almal,&nbsp;<strong>Sungwon Jeon</strong>,&nbsp;Milee Agarwal,&nbsp;Sweta Patel,&nbsp;Shivangi Patel,&nbsp;Youngjune Bhak,&nbsp;JeHoon Jun,&nbsp;Jong Bhak,&nbsp;Harish Padh<em>&nbsp; Genomics</em>&nbsp;, 2018</p>
+
'''7)&nbsp;The Galleria mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax'''
  
−
<p><strong>4)<em>Myotis rufoniger</em>&nbsp;genome sequence and analyses:&nbsp;<em>M</em>.&nbsp;<em>rufoniger&rsquo;s</em>genomic feature and the decreasing effective population size of&nbsp;<em>Myotis</em>&nbsp;bats</strong></p>
+
Kong, Hyun Gi, Hyun Ho Kim, Joon-hui Chung, JeHoon Jun, Soohyun Lee, Hak-Min Kim, '''Sungwon Jeon''', Seung Gu Park, Jong Bhak, and Choong-Min Ryu
  
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<p>Youngjune Bhak, Yeonsu Jeon,&nbsp;<strong>Sungwon Jeon</strong>,&nbsp;Oksung Chung,&nbsp;Sungwoong Jho,&nbsp;JeHoon Jun,&nbsp;Hak-Min Kim,&nbsp;Yongsoo Cho,&nbsp;Changhan Yoon,&nbsp;Seungwoo Lee,&nbsp;Jung-Hoon Kang,&nbsp;Jong-Deock Lim,&nbsp;Junghwa An,&nbsp;Yun Sung Cho&nbsp;,&nbsp;Doug-Young Ryu&nbsp;,&nbsp;Jong Bhak</p>
+
''Cell Reports'', 2019
  
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<p><em>PLOS&nbsp;ONE,&nbsp;</em>2017</p>
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'''6) Whole genome sequencing and bioinformatics analysis of two Egyptian genomes'''&nbsp;'''(Co-first Author)'''
  
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<p><strong>3)&nbsp;Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago</strong></p>
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Mahmoud ElHefnawi,&nbsp;'''Sungwon Jeon''', Youngjune Bhak, Asmaa ElFiky, Ahmed Horaiz, JeHoon Jun, Hyunho Kim, Jong Bhak
  
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<p>Veronika Siska, Eppie Ruth Jones, <strong>Sungwon Jeon</strong>, Youngjune Bhak, Hak-Min Kim, Yun Sung Cho, Hyunho Kim, Kyusang Lee, Elizaveta Veselovskaya, Tatiana Balueva, Marcos Gallego-Llorente, Michael Hofreiter, Daniel G. Bradley, Anders Eriksson, Ron Pinhasi, Jong Bhak and&nbsp;Andrea Manica</p>
+
Gene, 2018
  
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<p><em>Science Advances</em>, 2017, 3.2: e1601877.</p>
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5)&nbsp;'''Sequencing and analysis of the whole genome of Indian Gujarati male.'''
  
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<p><strong>2)&nbsp;Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly</strong></p>
+
Suhani Almal,&nbsp;'''Sungwon Jeon''',&nbsp;Milee Agarwal,&nbsp;Sweta Patel,&nbsp;Shivangi Patel,&nbsp;Youngjune Bhak,&nbsp;JeHoon Jun,&nbsp;Jong Bhak,&nbsp;Harish Padh''&nbsp; Genomics''&nbsp;, 2018
  
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<p>Soonok Kim&dagger;, Yun Sung Cho&dagger;, Hak-Min Kim&dagger;, Oksung Chung, Hyunho Kim, Sungwoong Jho, Hong Seomun, Jeongho Kim, Woo Young Bang, Changmu Kim, Junghwa An, Chang Hwan Bae, Youngjune Bhak, <strong>Sungwon Jeon</strong>, Hyejun Yoon, Yumi Kim, JeHoon Jun, HyeJin Lee, Suan Cho, Olga Uphyrkina, Aleksey Kostyria, John Goodrich, Dale Miquelle, Melody Roelke, John Lewis, Andrey Yurchenko, Anton Bankevich, Juok Cho, Semin Lee, Jeremy S. Edwards, Jessica A. Weber, Jo Cook, Sangsoo Kim, Hang Lee, Andrea Manica, Ilbeum Lee, Stephen J. O&rsquo;Brien, Jong Bhak and Joo-Hong Yeo</p>
+
'''4)''Myotis rufoniger''&nbsp;genome sequence and analyses:&nbsp;''M''.&nbsp;''rufoniger’s''genomic feature and the decreasing effective population size of&nbsp;''Myotis''&nbsp;bats'''
  
−
<p><em>Genome Biology</em>. 2016;17:211.</p>
+
Youngjune Bhak, Yeonsu Jeon,&nbsp;'''Sungwon Jeon''',&nbsp;Oksung Chung,&nbsp;Sungwoong Jho,&nbsp;JeHoon Jun,&nbsp;Hak-Min Kim,&nbsp;Yongsoo Cho,&nbsp;Changhan Yoon,&nbsp;Seungwoo Lee,&nbsp;Jung-Hoon Kang,&nbsp;Jong-Deock Lim,&nbsp;Junghwa An,&nbsp;Yun Sung Cho&nbsp;,&nbsp;Doug-Young Ryu&nbsp;,&nbsp;Jong Bhak
  
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<p><strong>1)&nbsp;The genetics of an early Neolithic pastoralist from the Zagros, Iran</strong></p>
+
''PLOS&nbsp;ONE,&nbsp;''2017
  
−
<p>M. Gallego-Llorente, S. Connell, E. R. Jones, D. C. Merrett, Y. Jeon, A. Eriksson, V. Siska, C. Gamba, C. Meiklejohn, R. Beyer,<strong> S. Jeon</strong>, Y. S. Cho, M. Hofreiter, J. Bhak, A. Manica, and R. Pinhasic</p>
+
'''3)&nbsp;Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago'''
  
−
<p><em>Scientific Reports</em>. 2016;6:31326.</p>
+
Veronika Siska, Eppie Ruth Jones, '''Sungwon Jeon''', Youngjune Bhak, Hak-Min Kim, Yun Sung Cho, Hyunho Kim, Kyusang Lee, Elizaveta Veselovskaya, Tatiana Balueva, Marcos Gallego-Llorente, Michael Hofreiter, Daniel G. Bradley, Anders Eriksson, Ron Pinhasi, Jong Bhak and&nbsp;Andrea Manica
 +
 
 +
''Science Advances'', 2017, 3.2: e1601877.
 +
 
 +
'''2)&nbsp;Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly'''
 +
 
 +
Soonok Kim†, Yun Sung Cho†, Hak-Min Kim†, Oksung Chung, Hyunho Kim, Sungwoong Jho, Hong Seomun, Jeongho Kim, Woo Young Bang, Changmu Kim, Junghwa An, Chang Hwan Bae, Youngjune Bhak, '''Sungwon Jeon''', Hyejun Yoon, Yumi Kim, JeHoon Jun, HyeJin Lee, Suan Cho, Olga Uphyrkina, Aleksey Kostyria, John Goodrich, Dale Miquelle, Melody Roelke, John Lewis, Andrey Yurchenko, Anton Bankevich, Juok Cho, Semin Lee, Jeremy S. Edwards, Jessica A. Weber, Jo Cook, Sangsoo Kim, Hang Lee, Andrea Manica, Ilbeum Lee, Stephen J. O’Brien, Jong Bhak and Joo-Hong Yeo
 +
 
 +
''Genome Biology''. 2016;17:211.
 +
 
 +
'''1)&nbsp;The genetics of an early Neolithic pastoralist from the Zagros, Iran'''
 +
 
 +
M. Gallego-Llorente, S. Connell, E. R. Jones, D. C. Merrett, Y. Jeon, A. Eriksson, V. Siska, C. Gamba, C. Meiklejohn, R. Beyer,'''S. Jeon''', Y. S. Cho, M. Hofreiter, J. Bhak, A. Manica, and R. Pinhasic
 +
 
 +
''Scientific Reports''. 2016;6:31326.

Latest revision as of 00:26, 23 August 2021

 

Sungwon Jeon

Education

  • 2016.3 - 2021.08 : Ph. D. in Biomedical Engineering, UNIST, Ulsan, Korea (Dissertation: Korean Genome Analysis; Advisor: Jong Bhak)
  • 2012.3 - 2016.2 : B.S. in Bio Medical Science ,UNIST, Ulsan, Korea
  • 2012.3 - 2016.2 : B.S. in Computer Science and Engineering ,UNIST, Ulsan, Korea (Multidisciplinary major)

Career

  • 2018.12 - present : Researcher, KOGIC, UNIST, Ulsan, Korea (Military service)
  • 2016.3 - 2021.08 : Graduate Researcher, TGI, UNIST, Ulsan, Korea
  • 2014.9 - 2016.2 : Undergrad. Researcher, The Genomics Institute, UNIST, Ulsan, Korea

Research Area

  • Bioinformatics
  • Genome Assembly Analysis
  • Comparative Genomics

List of Publication

21) Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome: MGI and Illumina sequencing benchmark for whole-genome sequencing
Hak-Min Kim, Sungwon Jeon, Oksung Chung, Je Hoon Jun, Hui-Su Kim, Asta Blazyte, Hwang-Yeol Lee, Youngseok Yu, Yun Sung Cho, Dan M Bolser, Jong Bhak
Giga Science. 2021.

20) Welfare Genome Project: A Participatory Korean Personal Genome Project With Free Health Check-Up and Genetic Report Followed by Counseling (Co-first author)
Yeonsu Jeon, Sungwon Jeon, Asta Blazyte, Yeo Jin Kim, Jasmin Junseo Lee, Youngjune Bhak, Yun Sung Cho, Yeshin Park, Eui-Kyu Noh, Andrea Manica, Jeremy S. Edwards, Dan Bolser, Sukyeon Kim, Yuji Lee, Changhan Yoon, Semin Lee, Byung Chul Kim, Neung Hwa Park, and Jong Bhak
Frontiers in Genetics. 2021.

19) Polygenic risk score validation using Korean genomes of 265 early-onset acute myocardial infarction patients and 636 healthy controls (Co-first author)
Youngjune Bhak, Yeonsu Jeon, Sungwon Jeon, Changhan Yoon, Min Kim, Asta Blazyte, Yeonkyung Kim, Younghui Kang, Changjae Kim, Sang Yeub Lee, Jang-Whan Bae, Weon Kim, Yeo Jin Kim, Jungae Shim, Nayeong Kim, Sung Chun, Byoung-Chul Kim, Byung Chul Kim, Semin Lee, Jong Bhak, Eun-Seok Shin
Plos One. 2021.

18) Complete genome sequence and bioinformatics analysis of nine Egyptian females with clinical information from different geographic regions in Egypt
Mahmoud ElHefnawi, Elsayed Hegazy, Asmaa Elfiky, Yeonsu Jeon, Sungwon Jeon, Jong Bhak, Fateheya Mohamed Metwally, Sumio Sugano, Terumi Horiuchi, Abe Kazumi, Asta Blazyte
Gene. 2020

17) Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens
RossBarnett, Michael V.Westbury, MarcelaSandoval-Velasco, Filipe GarrettVieira, SungwonJeon, GrantZazula, Michael D.Martin, Simon Y.W.Ho, NiklasMather, ShyamGopalakrishnan, JazmínRamos-Madrigal, Marcde Manuel, M. LisandraZepeda-Mendoza, AgostinhoAntunes, Aldo CarmonaBaez, BiniaDe Cahsan, GregerLarson, Stephen J.O’Brien, EduardoEizirik, Warren E.Johnson, Klaus-PeterKoepfli, AndreasWilting, JörnsFickel, LoveDalén, Eline D.Lorenzen17TomasMarques-Bonet, Anders J.Hansen, GuojieZhang, JongBhak, NobuyukiYamaguchi, M. Thomas P.Gilbert
Current Biology. 2020.

16) The whale shark genome reveals how genomic and physiological properties scale with body size
Jessica A. Weber, Seung Gu Park, Victor Luria, Sungwon Jeon,  Hak-Min Kim, Yeonsu Jeon,  Youngjune Bhak,  Je Hun Jun, Sang Wha Kim, Won Hee Hong,  Semin Lee,  Yun Sung Cho, Amir Karger,  John W. Cain,  Andrea Manica, Soonok Kim, Jae-Hoon Kim, Jeremy S. Edwards, Jong Bhak, and  George M. Church
PNAS. 2020.

15) Korean Genome Project: 1094 Korean personal genomes with clinical information (First author)
Sungwon Jeon, Youngjune Bhak, Yeonsong Choi, Yeonsu Jeon, Seunghoon Kim, Jaeyoung Jang, Jinho Jang, Asta Blazyte, Changjae Kim, Yeonkyung Kim, Jungae Shim, Nayeong Kim, Yeo Jin Kim, Seung Gu Park, Jungeun Kim, Yun Sung Cho, Yeshin Park, Hak-Min Kim, Byoung-Chul Kim, Neung-Hwa Park, Eun-Seok Shin, Byung Chul Kim, Dan Bolser, Andrea Manica, Jeremy S. Edwards, George Church, Semin Lee, Jong Bhak
Science Advances. 2020.

14) The origin and composition of Korean ethnicity analyzed by ancient and present-day genome sequences (Co-first author)

Jungeun Kim, Sungwon Jeon, Jae-Pil Choi, Asta Blazyte, Yeonsu Jeon, Jong-Il Kim, Jun Ohashi, Katsushi Tokunaga, Sumio Sugano, Suthat Fucharoen, Fahd Al-Mulla, Jong Bhak

Genome Biology and Evolution. 2020.


13) Decoding a highly mixed Kazakh genome (Co-first author)

Madina Seidualy, Asta Blazyte, Sungwon Jeon, Youngjune Bhak, Yeonsu Jeon, Jungeun Kim, Anders Eriksson, Dan Bolser, Changhan Yoon, Andrea Manica, Semin Lee & Jong Bhak 

Human Genetics. 2020.

12) Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity

HyeJin Lee, Jungeun Kim, Jessica A Weber, Oksung Chung, Yun Sung Cho, Sungwoong Jho, JeHoon Jun, Hak-Min Kim, Jeongheui Lim, Jae-Pil Choi, Sungwon Jeon, Asta Blazyte, Jeremy S Edwards, Woon Kee Paek, Jong Bhak

Molecules and Cells. 2020.

11) Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information 
Hui-Su Kim, Sungwon Jeon, Changjae Kim, Yeon Kyung Kim, Yun Sung Cho, Jungeun Kim, Asta Blazyte, Andrea Manica, Semin Lee, Jong Bhak

Giga Science. 2019.

10) Depression and suicide risk prediction models using blood-derived multi-omics data

Youngjune Bhak, Hyoung-oh Jeong, Yun Sung Cho, Sungwon Jeon, Juok Cho, Jeong-An Gim, Yeonsu Jeon, Asta Blazyte, Seung Gu Park, Hak-Min Kim, Eun-Seok Shin, Jong-Woo Paik, Hae-Woo Lee, Wooyoung Kang, Aram Kim, Yumi Kim, Byung Chul Kim, Byung-Joo Ham, Jong Bhak, Semin Lee

Translational Psychiatry. 2019.

9) The draft genome of an octocoral, Dendronephthya 'gigantea' 
Yeonsu Jeon, Seung Gu Park, Nayun Lee, Jessica A Weber, Hui-Su Kim, Sung-Jin Hwang, Seonock Woo, Hak-min Kim, Youngjune Bhak, Sungwon Jeon, Nayoung Lee, Yejin Jo, Asta Blazyte, Taewoo Ryu, Yun Sung Cho, Hyunho Kim, Jung-Hyun Lee, Hyung-Soon Yim, Jong Bhak, and Seungshic Yum

Genome Biol Evol. '2019.

8) The genome of the giant Nomura’s jellyfish sheds light on the early evolution of active predation

Hak-Min Kim, Jessica A. Weber, Nayoung Lee, Seung Gu Park, Yun Sung Cho, Youngjune Bhak, Nayun Lee, Yeonsu Jeon, Sungwon Jeon, Victor Luria, Amir Karger, Marc W. Kirschner, Ye Jin Jo, Seonock Woo, Kyoungsoon Shin,  Oksung Chung, Jae-Chun Ryu, Hyung-Soon Yim, Jung-Hyun Lee, Jeremy S. Edwards, Andrea Manica, Jong Bhak and Seungshic Yum

BMC Biology. 2019.

7) The Galleria mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax

Kong, Hyun Gi, Hyun Ho Kim, Joon-hui Chung, JeHoon Jun, Soohyun Lee, Hak-Min Kim, Sungwon Jeon, Seung Gu Park, Jong Bhak, and Choong-Min Ryu

Cell Reports, 2019

6) Whole genome sequencing and bioinformatics analysis of two Egyptian genomes (Co-first Author)

Mahmoud ElHefnawi, Sungwon Jeon, Youngjune Bhak, Asmaa ElFiky, Ahmed Horaiz, JeHoon Jun, Hyunho Kim, Jong Bhak

Gene, 2018

5) Sequencing and analysis of the whole genome of Indian Gujarati male.

Suhani Almal, Sungwon Jeon, Milee Agarwal, Sweta Patel, Shivangi Patel, Youngjune Bhak, JeHoon Jun, Jong Bhak, Harish Padh  Genomics , 2018

4)Myotis rufoniger genome sequence and analyses: M. rufoniger’sgenomic feature and the decreasing effective population size of Myotis bats

Youngjune Bhak, Yeonsu Jeon, Sungwon Jeon, Oksung Chung, Sungwoong Jho, JeHoon Jun, Hak-Min Kim, Yongsoo Cho, Changhan Yoon, Seungwoo Lee, Jung-Hoon Kang, Jong-Deock Lim, Junghwa An, Yun Sung Cho , Doug-Young Ryu , Jong Bhak

PLOS ONE, 2017

3) Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago

Veronika Siska, Eppie Ruth Jones, Sungwon Jeon, Youngjune Bhak, Hak-Min Kim, Yun Sung Cho, Hyunho Kim, Kyusang Lee, Elizaveta Veselovskaya, Tatiana Balueva, Marcos Gallego-Llorente, Michael Hofreiter, Daniel G. Bradley, Anders Eriksson, Ron Pinhasi, Jong Bhak and Andrea Manica

Science Advances, 2017, 3.2: e1601877.

2) Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly

Soonok Kim†, Yun Sung Cho†, Hak-Min Kim†, Oksung Chung, Hyunho Kim, Sungwoong Jho, Hong Seomun, Jeongho Kim, Woo Young Bang, Changmu Kim, Junghwa An, Chang Hwan Bae, Youngjune Bhak, Sungwon Jeon, Hyejun Yoon, Yumi Kim, JeHoon Jun, HyeJin Lee, Suan Cho, Olga Uphyrkina, Aleksey Kostyria, John Goodrich, Dale Miquelle, Melody Roelke, John Lewis, Andrey Yurchenko, Anton Bankevich, Juok Cho, Semin Lee, Jeremy S. Edwards, Jessica A. Weber, Jo Cook, Sangsoo Kim, Hang Lee, Andrea Manica, Ilbeum Lee, Stephen J. O’Brien, Jong Bhak and Joo-Hong Yeo

Genome Biology. 2016;17:211.

1) The genetics of an early Neolithic pastoralist from the Zagros, Iran

M. Gallego-Llorente, S. Connell, E. R. Jones, D. C. Merrett, Y. Jeon, A. Eriksson, V. Siska, C. Gamba, C. Meiklejohn, R. Beyer,S. Jeon, Y. S. Cho, M. Hofreiter, J. Bhak, A. Manica, and R. Pinhasic

Scientific Reports. 2016;6:31326.

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