Difference between revisions of "논문"

Revision as of 15:15, 17 July 2020

Year	Title	Publisher

2020	Korean Genome Project: 2094 Korean personal genomes with clinical information 번역본	ScienceAdvances
	The Origin and Composition of Korean Ethnicity Analyzed by Ancient and Present-Day Genome Sequences 번역본	Genome Biology and Evolution
	Decoding a Highly Mixed Kazakh Genome	Human Genetics
	Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity	Molecules and Cells

2019	Brca2 Abrogation Engages With the Alternative Lengthening of Telomeres via Break-Induced Replication 번역본	The FEBS Journal
	Chromosome-scale Assembly Comparison of the Korean Reference Genome KOREF From PromethION and PacBio With Hi-C Mapping Information	GigaScience
	Combinatory Analysis of Cell-free and Circulating Tumor Cell DNAs Provides More Variants for Cancer Treatment	Anticancer Research
	Comparison of Exercise Electrocardiography and Magnetocardiography for Detection of Coronary Artery Disease Using ST-segment Fluctuation Score	IOS Press
	Depression and Suicide Risk Prediction Models Using Blood-Derived Multi-Omics Data 번역본	Translational Psychiatry
	The Draft Genome of an Octocoral, Dendronephthya Gigantea 번역본	Genome Biology and Evolution
	The Galleria Mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax	Cell Reports
	The Genome of the Giant Nomura's Jellyfish Sheds Light on the Early Evolution of Active Predation 번역본	BMC Biology
	Investigation of Hanwoo-specific Structural Variations Using Whole-Genome Sequencing Data	Genes & Genomics
	Raptor Genomes Reveal Evolutionary Signatures of Predatory and Nocturnal Lifestyles 번역본	Genome Biology
	Sequencing and Analysis of the Whole Genome of Indian Gujarati Male 번역본	Genomics

2018	Genomic Analysis Reveals Secondary Glioblastoma After Radiotherapy in a Subset of Recurrent Medulloblastomas	Acta Neuropathologica
	Genomic Structure of the Native Inhabitants of Peninsular Malaysia and North Borneo Suggests Complex Human Population History in Southeast Asia	Human Genetics
	Grading System for Periodontitis by Analyzing Levels of Periodontal Pathogens in Saliva	PLoS One
	KoVariome: Korean National Standard Reference Variome Database of Whole Genomes With Comprehensive SNV, Indel, CNV, and SV Analyses 번역본	Scientific Reports
	Magnetocardiography Scoring System to Predict the Presence of Obstructive Coronary Artery Disease	Clinical Hemorheology and Microcirculation
	Whole Genome Sequencing and Bioinformatics Analysis of Two Egyptian Genomes 번역본	Gene

2017	Analysis of the FGF Gene Family Provides Insights Into Aquatic Adaptation in Cetaceans	Scientific Reports
	Corrigendum: An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes 번역본	Nature Communications
	Genome-wide Data From Two Early Neolithic East Asian Individuals Dating to 7700 Years Ago 번역본	ScienceAdvances
	Myotis Rufoniger Genome Sequence and Analyses: M. Rufoniger's Genomic Feature and the Decreasing Effective Population Size of Myotis Bats 번역본	PLoS One
	Perspectives Provided by Leopard and Other Cat Genomes: How Diet Determined the Evolutionary History of Carnivores, Omnivores, and Herbivores	BMB Reports

2016	An Adaptive Detection Method for Fetal Chromosomal Aneuploidy Using Cell-Free DNA From 447 Korean Women	BMC Medical Genomics
	Comparison of Carnivore, Omnivore, and Herbivore Mammalian Genomes With a New Leopard Assembly	Genome Biology
	Comparison of Two High-Throughput Semiconductor Chip Sequencing Platforms in Noninvasive Prenatal Testing for Down Syndrome in Early Pregnancy	BMC Medical Genomics
	An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes	Nature Communications
	The Genetics of an Early Neolithic Pastoralist From the Zagros, Iran	Scientific Reports
	Genomes of Coral Dinoflagellate Symbionts Highlight Evolutionary Adaptations Conducive to a Symbiotic Lifestyle	Scientific Reports
	RNA-Seq Analysis Reveals New Evidence for Inflammation-Related Changes in Aged Kidney	Oncotarget
	Short-term Calorie Restriction Ameliorates Genomewide, Age-Related Alterations in DNA Methylation	Aging Cell

2015	Ancient Ethiopian Genome Reveals Extensive Eurasian Admixture Throughout the African Continent	Science
	Characterization of cetacean Numt and its application into cetacean phylogeny	Genes & Genomics
	The First Whole Genome and Transcriptome of the Cinereous Vulture Reveals Adaptation in the Gastric and Immune Defense Systems and Possible Convergent Evolution Between the Old and New World Vultures	Genome Biology
	Genome-wide Analysis of DNA Methylation Before-And After Exercise in the Thoroughbred Horse With MeDIP-Seq	Molecules and Cells
	Genomic Legacy of the African Cheetah, Acinonyx Jubatus	Genome Biology
	HEpD: A Database Describing Epigenetic Differences Between Thoroughbred and Jeju Horses	Gene
	HExDB: a database for epigenetic changes occurring after horse exercise	Genes & Genomics
	Insights Into the Evolution of Longevity From the Bowhead Whale Genome	Cell Reports
	Profiling Age-Related Epigenetic Markers of Stomach Adenocarcinoma in Young and Old Subjects	Cancer Informatics
	SLC15A2 Genomic Variation Is Associated With the Extraordinary Response of Sorafenib Treatment: Whole-Genome Analysis in Patients With Hepatocellular Carcinoma	Oncotarget
	Whole Genome Sequencing of an Ethnic Pathan (Pakhtun) From the North-West of Pakistan	BMC Genomics

2014	The Feasibility Study of Non-Invasive Fetal Trisomy 18 and 21 Detection With Semiconductor Sequencing Platform	PLoS One
	Genome-wide Analysis of DNA Methylation Patterns in Horse	BMC Genomics
	Genomic Profile Analysis of Diffuse-Type Gastric Cancers	Genome Biology
	Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing	PLoS One
	Minke Whale Genome and Aquatic Adaptation in Cetaceans 번역본	Nature Genetics
	New Lung Cancer Panel for High-Throughput Targeted Resequencing	Genomics & Informatics
	PPP1R1B-STARD3 Chimeric Fusion Transcript in Human Gastric Cancer Promotes Tumorigenesis Through Activation of PI3K/AKT Signaling	Oncogene
	Whole-genome Analysis of a Patient With Early-Stage Small-Cell Lung Cancer	Pharmacogenomics
	Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers	BMC Genomics
	Whole Genome Sequence and Analysis of the Marwari Horse Breed and Its Genetic Origin	BMC Genomics

2013	Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers	Genome Research
	The Genetic Basis of White Tigers	Current Biology
	iAnn: An Event Sharing Platform for the Life Sciences	Bioinformatics
	Peeling Back the Evolutionary Layers of Molecular Mechanisms Responsive to Exercise-Stress in the Skeletal Muscle of the Racing Horse	DNA Research
	The Tiger Genome and Comparative Analysis With Lion and Snow Leopard Genomes 번역본	Nature Communications
	Whole genome comparison of donor and cloned dogs	Scientific Reports

2012	De Novo Transcriptome Sequencing of Momordica Cochinchinensis to Identify Genes Involved in the Carotenoid Biosynthesis	Plant Molecular Biology
	Genetic dating indicates that the Asian–Papuan admixture through Eastern Indonesia corresponds to the Austronesian expansion	PNAS
	Low Budget Analysis of Direct-To-Consumer Genomic Testing Familial Data	F1000Research
	MetaBase--the Wiki-Database of Biological Databases	Nucleic Acids Research
	A Public Resource Facilitating Clinical Use of Genomes	PNAS
	Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq	BMC Genomics

2011	BetaDock: Shape-Priority Docking Method Based on Beta-Complex	Journal of Biomolecular Structure and Dynamics
	Gene Expression Pattern in Transmitochondrial Cytoplasmic Hybrid Cells Harboring Type 2 Diabetes-Associated Mitochondrial DNA Haplogroups	PLoS One
	Identification of Close Relatives in the HUGO Pan-Asian SNP Database	PLoS One
	Liverome: A Curated Database of Liver Cancer-Related Gene Signatures With Self-Contained Context Information	BMC Genomics
	Mutational Hotspots in the Mitochondrial Genome of Lung Cancer	Biochemical and Biophysical Research Communications
	PanSNPdb: The Pan-Asian SNP Genotyping Database	PLoS One
	Population Genetic Structure of Peninsular Malaysia Malay Sub-Ethnic Groups	PLoS One

2010	Alpha-glucosidase Folding During Urea Denaturation: Enzyme Kinetics and Computational Prediction	Applied Biochemistry and Biotechnology
	Differential Evolutionary Rates of Neuronal Transcriptome in Aplysia Kurodai and Aplysia Californica as a Tool for Gene Mining	Journal of Neurogenetics
	The Effect of Trifluoroethanol on Tyrosinase Activity and Conformation: Inhibition Kinetics and Computational Simulations	Applied Biochemistry and Biotechnology
	Gene Flow Between the Korean Peninsula and Its Neighboring Countries	PLoS One
	Kinetics of Zn(2+)-induced Brain Type Creatine Kinase Unfolding and Aggregation	Applied Biochemistry and Biotechnology
	PDBWiki: Added Value Through Community Annotation of the Protein Data Bank	Database
	A Proposal for the Revision of Molecular Boundary Typology	Journal of Biomolecular Structure and Dynamics
	Protein Network Prediction and Topological Analysis in Leishmania Major as a Tool for Drug Target Selection	BMC Bioinformatics
	Sphericity of a Protein via the Beta-Complex	Journal of Molecular Graphs and Modelling
	Structural Analysis and Inhibitory Kinetics of Brain Type Creatine Kinase by Sodium Dodecyl Sulfate	Applied Biochemistry and Biotechnology
	Systematic Cyanobacterial Membrane Proteome Analysis by Combining Acid Hydrolysis and Digestive Enzymes With Nano-Liquid chromatography-Fourier Transform Mass Spectrometry	Journal of Chromatography A
	Whole-genome Sequencing and Intensive Analysis of the Undomesticated Soybean (Glycine Soja Sieb. And Zucc.) Genome	PNAS

2009	BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources	BMC Genomics
	COMUS: Clinician-Oriented locus-specific MUtation detection and deposition System	BMC Genomics
	DNA microarray analyses and interactomic predictions for atopic dermatitis	Journal of Dermatological Science
	Dysregulated genes of extrinsic type of atopic dermatitis: 34K microarray and interactomic analyses	Journal of Dermatological Science
	The effects of acrylamide on brain creatine kinase: inhibition kinetics and computational docking simulation	International Journal of Biological Macromolecules
	The first Korean genome sequence and analysis: full genome sequencing for a socio-ethnic group	Genome Research
	Gevab: a prototype genome variation analysis browsing server	BMC Bioinformatics
	The Korean Bird Information System (KBIS) through open and public participation	BMC Bioinformatics
	Mapping human genetic diversity in Asia	Science
	MitoInteractome: mitochondrial protein interactome database, and its application in 'aging network' analysis	BMC Genomics
	MitoVariome: a variome database of human mitochondrial DNA	BMC Genomics
	PDbase: a database of Parkinson's disease-related genes and genetic variation using substantia nigra ESTs	BMC Genomics
	Planning the human variome project: the Spain report	Human Mutation
	Profiling the dysregulated genes of keratinocytes in atopic dermatitis patients: cDNA microarray and interactomic analyses	Journal of Dermatological Science
	PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440	BMC Genomics
	ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database	Human Mutation
	Transcriptome and protein domain analyses in Aplysia nervous system with evolutionary implications	Communicative & Integrative Biology

2008	Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countries	Bioinformatics
	Cyanobacterial hybrid kinase Sll0043 regulates phototaxis by suppressing pilin and twitching motility protein	Journal of Microbiology
	The effect of histidine residue modification on tyrosinase activity and conformation: inhibition kinetics and computational prediction	Journal of Biomolecular Structure and Dynamics
	Identification of gene-related Korean patents and construction of a database server for Korean patent sequences	Biotechnology and Bioprocess Engineering
	An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases	BMC Bioinformatics
	An integrated Korean biodiversity and genetic information retrieval system	BMC Bioinformatics
	MassNet: a functional annotation service for protein mass spectrometry data	Nucleic Acids Research
	Personal Genomics, Bioinformatics, and Variomics	Genomics & Informatics
	Pocket extraction on proteins via the Voronoi diagram of spheres	Journal of Molecular Graphs and Modelling
	Predicting the interactome of Xanthomonas oryzae pathovar oryzae for target selection and DB service	BMC Bioinformatics
	Prediction and evaluation of protein-protein interaction in keratinocyte differentiation	Biochemical and Biophysical Research Communications
	Proteomic approaches to the analysis of atopic dermatitis and new insights from interactomics	Proteomics - Clinical Applications
	SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions	BMC Bioinformatics
	Structural Bioinformatics Analysis of Disease-related Mutations	Genomics & Informatics
	SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803	BMC Bioinformatics
	Transcriptome analysis and identification of regulators for long-term plasticity in Aplysia kurodai	PNAS

2007	Biological Object Downloader (BOD) Service for Easy Download and Management of Biological Databases	Genetics & Informatics
	CONSORF: a consensus prediction system for prokaryotic coding sequences	Bioinformatics
	Genomic distribution of simple sequence repeats in Brassica rapa	Molecules and Cells
	GS2PATH: a web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data	Bioinformation
	Impact of transcriptional properties on essentiality and evolutionary rate	Genetics
	Multi-Resolution Protein Model	Lecture Notes in Computer Science

2006	BioCC: An Openfree Hypertext Bio Community Cluster for Biology	Genomics & Informatics
	Developmental rate and ploidy of embryos produced by nuclear transfer with different activation treatments in cattle	Animal Reproduction Science
	Functional annotation and analysis of Korean patented biological sequences using bioinformatics	Molecules and Cells
	Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain information	Nucleic Acids Research
	Parameter selection of pocket extraction algorithm using interaction interface	Journal of Zhejiang University - SCIENCE A
	Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa	Plant Cell

2005	Architecture of basic building blocks in protein and domain structural interaction networks	Bioinformatics
	BioCovi: A Visualization Service for Comparative Genomics Analysis	Genomics & Informatics
	BioSubroutine: an Open Web Server for Bioinformatics Algorithms and Subroutines	Genomics & Informatics
	Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map)	Bioinformatics
	Euclidean Voronoi diagrams of 3D spheres and applications to protein structure analysis	Japan Journal of Industrial and Applied Mathematics
	HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis	Genomics & Informatics
	A protein domain interaction interface database: InterPare	BMC Informatics
	PSIbase: a database of Protein Structural Interactome map (PSIMAP)	Bioinformatics

2004	The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions	BMC Genomics
	The Atom of Evolution	Genomics & Informatics
	High Correlation between Alu Elements and the Conversion of 3' UTR of mRNAs Processed Pseudogenes	Genomics & Informatics
	HPID: the Human Protein Interaction Database	Bioinformatics
	Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP)	Bioinformatics
	Using convex hulls to extract interaction interfaces from known structures	Bioinformatics

2003	Biological Network Evolution Hypothesis Applied to Protein Structural Interactome	Genomics & Informatics
	Challenges and New Approaches in Genomics and Bioinformatics	Genomics & Informatics
	Different activation treatments for successful development of bovine oocytes following intracytoplasmic sperm injection	Zygote
	Predicting Protein Interactions in Human by Homologous Interactions in Yeast	Lecture Notes in Computer Science
	Visualisation and graph-theoretic analysis of a large-scale protein structural interactome	BMC Bioinformatics
	Visualization and analysis of protein interactions	Bioinformatics

2002	InterViewer: Dynamic Visualization of Protein-Protein Interactions	Lecture Notes in Computer Science
	Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair	Genomic Informatics
	Protein Interactions in the Whole Human Genome	Genome Informatics
	Sequence similarity between stereocilin and otoancorin points to a unified mechanism for mechanotransduction in the mammalian inner ear	BMC Cell Biology

2001	Conservation of protein interaction network in evolution	Genome Informatics
	A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3	Nucleic Acids Research
	Generating protein interaction maps from incomplete data: application to fold assignment	Bioinformatics
	An Integrated Bioinformatic Search Server: Sequences, Structure, Interaction, and Function of Proteins (SSIF) Server	Genome Informatics
	Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast	Journal of Molecular Biology
	PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information	Nucleic Acids Research
	Protein Classification Comparison Server	Genome Informatics

2000	DaliLite workbench for protein structure comparison	Bioinformatics
	Estimating the significance of sequence order in protein secondary structure and prediction	Bioinformatics
	Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL	Bioinformatics
	RSDB: representative protein sequence databases have high information content	Bioinformatics
	Sequence search algorithm assessment and testing toolkit (SAT)	Bioinformatics

1998	DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins	Bioinformatics
	Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods	Journal of Molecular Biology
	Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements	PNAS

1997	Intermediate sequences increase the detection of homology between sequences	Journal of Molecular Biology

1996	Protein structure prediction: playing the fold	Trends in Biochemical Sciences
1996	Update on protein structure prediction: results of the 1995 IRBM workshop	Folding and Design

1995	Fold recognition and ab initio structure predictions using hidden Markov models and beta-strand pair potentials	Proteins

Difference between revisions of "논문"

Revision as of 15:15, 17 July 2020

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-'''2020'''
+{| border="0" cellpadding="1" cellspacing="1"
+|-
+! scope="col" style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(255, 204, 204);" | Year
+! scope="col" style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(255, 204, 204);" | Title
+! scope="col" style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(255, 204, 204);" | Publisher
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px;" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px;" | &nbsp;
+|-
+| colspan="1" rowspan="4" style="text-align: center; vertical-align: middle; height: 50px;" | 2020
+| style="text-align: center; vertical-align: middle; height: 50px;" |
+[https://advances.sciencemag.org/content/6/22/eaaz7835 Korean Genome Project: 2094 Korean personal genomes with clinical information]&nbsp;[[Korean_Genome_Project:_1,094_Korean_personal_genomes_with_clinical_information|번역본]]
-*[https://advances.sciencemag.org/content/6/22/eaaz7835 Korean Genome Project: 1094 Korean personal genomes with clinical information.&nbsp;Jeon, S., Bhak, Y., Choi, Y. &nbsp;Jeon, Y., Kim, S., Jang, J., . . . &nbsp;Bhak, J. (2020) Sci Adv.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | ScienceAdvances
-<div style="margin-left: 40px;"><&nbsp;[[Korean_Genome_Project:_1,094_Korean_personal_genomes_with_clinical_information|번역본]]&nbsp;></div>
+|-
-*[https://academic.oup.com/gbe/advance-article/doi/10.1093/gbe/evaa062/5812782 The origin and composition of Korean ethnicity analyzed by ancient and present-day genome sequences. Kim, J., Jeon, S., Choi, J., Blazyte, A., Jeon, Y., . . . Bhak, J. (2020)&nbsp;Genome Biol. Evol.]
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-<div style="margin-left: 40px;"><&nbsp;[[The_origin_and_composition_of_Korean_ethnicity_analyzed_by_ancient_and_present-day_genome_sequences|번역본]]&nbsp;></div>
+[https://academic.oup.com/gbe/article/12/5/553/5812782 The Origin and Composition of Korean Ethnicity Analyzed by Ancient and Present-Day Genome Sequences]&nbsp;[[The_origin_and_composition_of_Korean_ethnicity_analyzed_by_ancient_and_present-day_genome_sequences|번역본]]
-*[https://www.ncbi.nlm.nih.gov/pubmed/32076829 Decoding a highly mixed Kazakh genome. Seidualy, M., Blazyte, A., Jeon, S., Bhak, Y., Jeon Y., Kim, J., . . . Bhak, J.(2020)&nbsp;Hum Genet.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/31940721 Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity. Lee, H., Kim, J., Weber, J. A., Chung, O., Cho, Y. S., Jho, S., . . . Bhak, J. (2020). Mol Cells.]
-'''2019'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology and Evolution
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" |
+[https://pubmed.ncbi.nlm.nih.gov/32076829/ Decoding a Highly Mixed Kazakh Genome]
-*[https://www.ncbi.nlm.nih.gov/pubmed/30811824 Brca2 abrogation engages with the alternative lengthening of telomeres via break-induced replication. Kwon, M. S., Lee, J. J., Min, J., Hwang, K., Park, S. G., Kim, E. H., . . . Lee, H. (2019). FEBS J, 286(10), 1841-1858.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Human Genetics
-*[https://www.ncbi.nlm.nih.gov/pubmed/31794015 Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information. Kim, H. S., Jeon, S., Kim, C., Kim, Y. K., Cho, Y. S., Kim, J., . . . Bhak, J. (2019). Gigascience, 8(12).]
+|-
-<div style="margin-left: 40px;"><&nbsp;[[Chromosome-scale_assembly_comparison_of_the_Korean_Reference_Genome_KOREF_from_PromethION_and_PacBio_with_Hi-C_mapping_information.|번역본]]&nbsp;></div>
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-*[https://www.ncbi.nlm.nih.gov/pubmed/31810925 Combinatory Analysis of Cell-free and Circulating Tumor Cell DNAs Provides More Variants for Cancer Treatment. Lee, S. Y., Chae, D. K., An, J., Yoo, S., Jung, S., Chae, C. H., . . . Cho, D. H. (2019). Anticancer Res, 39(12), 6595-6602.]
+[http://www.molcells.org/journal/view.html?doi=10.14348/molcells.2019.0190 Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity]
-*[https://www.ncbi.nlm.nih.gov/pubmed/30775972 Comparison of exercise electrocardiography and magnetocardiography for detection of coronary artery disease using ST-segment fluctuation score. Shin, E. S., Chung, J. H., Park, S. G., Saleh, A., Lam, Y. Y., Bhak, J., . . . Brachmann, J. (2019). Clin Hemorheol Microcirc, 73(2), 283-291.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/31624227 Depression and suicide risk prediction models using blood-derived multi-omics data. Bhak, Y., Jeong, H. O., Cho, Y. S., Jeon, S., Cho, J., Gim, J. A., . . . Lee, S. (2019). Transl Psychiatry, 9(1), 262.]
-<div style="margin-left: 40px;"><&nbsp;[[Depression_and_suicide_risk_prediction_models_using_blood-derived_multi-omics_data.|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/30825304 The Draft Genome of an Octocoral, Dendronephthya gigantea. Jeon, Y., Park, S. G., Lee, N., Weber, J. A., Kim, H. S., Hwang, S. J., . . . Yum, S. (2019). Genome Biol Evol, 11(3), 949-953.]
-<div style="margin-left: 40px;"><&nbsp;[[The_Draft_Genome_of_an_Octocoral,_Dendronephthya_gigantea.|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/30811993 The Galleria mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax. Kong, H. G., Kim, H. H., Chung, J. H., Jun, J., Lee, S., Kim, H. M., . . . Ryu, C. M. (2019). Cell Rep, 26(9), 2451-2464 e2455.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/30925871 The genome of the giant Nomura's jellyfish sheds light on the early evolution of active predation. Kim, H. M., Weber, J. A., Lee, N., Park, S. G., Cho, Y. S., Bhak, Y., . . . Yum, S. (2019). BMC Biol, 17(1), 28.]
-<div style="margin-left: 40px;"><&nbsp;[[The_genome_of_the_giant_Nomura's_jellyfish_sheds_light_on_the_early_evolution_of_active_predation.|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/30535859 Investigation of Hanwoo-specific structural variations using whole-genome sequencing data. Park, J., Shin, W., Mun, S., Oh, M. H., Lim, D., Oh, D. Y., . . . Han, K. (2019). Genes Genomics, 41(2), 233-240.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/31464627 Raptor genomes reveal evolutionary signatures of predatory and nocturnal lifestyles. Cho, Y. S., Jun, J. H., Kim, J. A., Kim, H. M., Chung, O., Kang, S. G., . . . Bhak, J. (2019). Genome Biology, 20(1), 181.]
-<div style="margin-left: 40px;"><&nbsp;[[Raptor_genomes_reveal_evolutionary_signatures_of_predatory_and_nocturnal_lifestyles.|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/29432975 Sequencing and analysis of the whole genome of Indian Gujarati male. Almal, S., Jeon, S., Agarwal, M., Patel, S., Patel, S., Bhak, Y., . . . Padh, H. (2019). Genomics, 111(2), 196-204.]
-<div style="margin-left: 40px;"><&nbsp;[[Sequencing_and_analysis_of_the_whole_genome_of_Indian_Gujarati_male.|번역본]]&nbsp;></div>
-'''2018'''
-*[https://www.ncbi.nlm.nih.gov/pubmed/29644394 Genomic analysis reveals secondary glioblastoma after radiotherapy in a subset of recurrent medulloblastomas. Phi, J. H., Park, A. K., Lee, S., Choi, S. A., Baek, I. P., Kim, P., . . . Kim, S. K. (2018). Acta Neuropathol, 135(6), 939-953.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Molecules and Cells
-*[https://www.ncbi.nlm.nih.gov/pubmed/29383489 Genomic structure of the native inhabitants of Peninsular Malaysia and North Borneo suggests complex human population history in Southeast Asia. Yew, C. W., Lu, D., Deng, L., Wong, L. P., Ong, R. T., Lu, Y., . . . Hoh, B. P. (2018). Hum Genet, 137(2), 161-173.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/30475813 Grading system for periodontitis by analyzing levels of periodontal pathogens in saliva. Kim, E. H., Joo, J. Y., Lee, Y. J., Koh, J. K., Choi, J. H., Shin, Y., . . . Lee, J. Y. (2018). PLoS One, 13(11), e0200900.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/29618732 KoVariome: Korean National Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses. Kim, J., Weber, J. A., Jho, S., Jang, J., Jun, J., Cho, Y. S., . . . Bhak, J. (2018). Sci Rep, 8(1), 5677.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
-<div style="margin-left: 40px;"><&nbsp;[[KoVariome:_Korean_National_Standard_Reference_Variome_database_of_whole_genomes_with_comprehensive_SNV,_indel,_CNV,_and_SV_analyses.|번역본]]&nbsp;></div>
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/30320564 Magnetocardiography scoring system to predict the presence of obstructive coronary artery disease. Shin, E. S., Park, S. G., Saleh, A., Lam, Y. Y., Bhak, J., Jung, F., . . . Brachmann, J. (2018). Clin Hemorheol Microcirc, 70(4), 365-373.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/29775755 Whole genome sequencing and bioinformatics analysis of two Egyptian genomes. ElHefnawi, M., Jeon, S., Bhak, Y., ElFiky, A., Horaiz, A., Jun, J., . . . Bhak, J. (2018). Gene, 668, 129-134.]
-<div style="margin-left: 40px;"><&nbsp;[[Whole_genome_sequencing_and_bioinformatics_analysis_of_two_Egyptian_genomes|번역본]]&nbsp;></div>
-'''2017'''
-*[https://www.ncbi.nlm.nih.gov/pubmed/28074842 Analysis of the FGF gene family provides insights into aquatic adaptation in cetaceans. Nam, K., Lee, K. W., Chung, O., Yim, H. S., Cha, S. S., Lee, S. W., . . . Jeong, J. Y. (2017). Sci Rep, 7, 40233.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/28991236 Corrigendum: An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes. Cho, Y. S., Kim, H., Kim, H. M., Jho, S., Jun, J., Lee, Y. J., . . . Bhak, J. (2017). Nat Commun, 8, 16168.]
+|-
-<div style="margin-left: 40px;"><&nbsp;[[An_ethnically_relevant_consensus_Korean_reference_genome_is_a_step_towards_personal_reference_genomes.|번역본]]&nbsp;></div>
+| colspan="1" rowspan="11" style="text-align: center; vertical-align: middle; height: 50px;" | 2019
-*[https://www.ncbi.nlm.nih.gov/pubmed/28164156 Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago. Siska, V., Jones, E. R., Jeon, S., Bhak, Y., Kim, H. M., Cho, Y. S., . . . Manica, A. (2017). Sci Adv, 3(2), e1601877.]
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-<div style="margin-left: 40px;">< [[Genome-wide_data_from_two_early_Neolithic_East_Asian_individuals_dating_to_7700_years_ago._Siska,_V.,_Jones,_E._R.,_Jeon,_S.,_Bhak,_Y.,_Kim,_H._M.,_Cho,_Y._S.,_._._._Manica,_A._(2017)._Sci_Adv,_3(2),_e1601877|번역본]] ></div>
+[https://pubmed.ncbi.nlm.nih.gov/30811824/ Brca2 Abrogation Engages With the Alternative Lengthening of Telomeres via Break-Induced Replication]&nbsp;[[Chromosome-scale_assembly_comparison_of_the_Korean_Reference_Genome_KOREF_from_PromethION_and_PacBio_with_Hi-C_mapping_information.|번역본]]
-*[https://www.ncbi.nlm.nih.gov/pubmed/28678835 Myotis rufoniger genome sequence and analyses: M. rufoniger's genomic feature and the decreasing effective population size of Myotis bats. Bhak, Y., Jeon, Y., Jeon, S., Chung, O., Jho, S., Jun, J., . . . Bhak, J. (2017). PLoS One, 12(7), e0180418.]
-<div style="margin-left: 40px;"><&nbsp;[[Myotis_rufoniger_genome_sequence_and_analyses|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/28042784 Perspectives provided by leopard and other cat genomes: how diet determined the evolutionary history of carnivores, omnivores, and herbivores. Kim, S., Cho, Y. S., Bhak, J., O'Brian, S. J., & Yeo, J. H. (2017). BMB Rep, 50(1), 3-4.]
-'''2016'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | The FEBS Journal
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31794015/" |
+[https://pubmed.ncbi.nlm.nih.gov/31794015/ Chromosome-scale Assembly Comparison of the Korean Reference Genome KOREF From PromethION and PacBio With Hi-C Mapping Information]
-*[https://www.ncbi.nlm.nih.gov/pubmed/27716407 An adaptive detection method for fetal chromosomal aneuploidy using cell-free DNA from 447 Korean women. Kim, S., Jung, H., Han, S. H., Lee, S., Kwon, J., Kim, M. G., . . . Bhak, J. (2016). Bmc Medical Genomics, 9(1), 61.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | GigaScience
-*[https://www.ncbi.nlm.nih.gov/pubmed/27802837 Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly. Kim, S., Cho, Y. S., Kim, H. M., Chung, O., Kim, H., Jho, S., . . . Yeo, J. H. (2016). Genome Biology, 17(1), 211.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/27129388 Comparison of two high-throughput semiconductor chip sequencing platforms in noninvasive prenatal testing for Down syndrome in early pregnancy. Kim, S., Jung, H., Han, S. H., Lee, S., Kwon, J., Kim, M. G., . . . Bhak, J. (2016). Bmc Medical Genomics, 9(1), 22.]
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-*[https://www.ncbi.nlm.nih.gov/pubmed/27882922 An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes. Cho, Y. S., Kim, H., Kim, H. M., Jho, S., Jun, J., Lee, Y. J., . . . Bhak, J. (2016). Nat Commun, 7, 13637.]
+[https://pubmed.ncbi.nlm.nih.gov/31810925/ Combinatory Analysis of Cell-free and Circulating Tumor Cell DNAs Provides More Variants for Cancer Treatment]
-*[https://www.ncbi.nlm.nih.gov/pubmed/27502179 The genetics of an early Neolithic pastoralist from the Zagros, Iran. Gallego-Llorente, M., Connell, S., Jones, E. R., Merrett, D. C., Jeon, Y., Eriksson, A., . . . Pinhasi, R. (2016). Sci Rep, 6, 31326.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/28004835 Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle. Aranda, M., Li, Y., Liew, Y. J., Baumgarten, S., Simakov, O., Wilson, M. C., . . . Voolstra, C. R. (2016). Sci Rep, 6, 39734.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/27153548 RNA-Seq analysis reveals new evidence for inflammation-related changes in aged kidney. Park, D., Kim, B. C., Kim, C. H., Choi, Y. J., Jeong, H. O., Kim, M. E., . . . Chung, H. Y. (2016). Oncotarget, 7(21), 30037-30048.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/27561685 Short-term calorie restriction ameliorates genomewide, age-related alterations in DNA methylation. Kim, C. H., Lee, E. K., Choi, Y. J., An, H. J., Jeong, H. O., Park, D., . . . Chung, H. Y. (2016). Aging Cell, 15(6), 1074-1081.]
-'''2015'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | Anticancer Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" |
+[https://pubmed.ncbi.nlm.nih.gov/30775972/ Comparison of Exercise Electrocardiography and Magnetocardiography for Detection of Coronary Artery Disease Using ST-segment Fluctuation Score]
-*[https://www.ncbi.nlm.nih.gov/pubmed/26449472 Ancient Ethiopian genome reveals extensive Eurasian admixture throughout the African continent. Gallego Llorente, M., Jones, E. R., Eriksson, A., Siska, V., Arthur, K. W., Arthur, J. W., . . . Manica, A. (2015). Science, 350(6262), 820-822.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | IOS Press
-*[https://link.springer.com/article/10.1007/s13258-015-0353-7 Characterization of cetacean Numt and its application into cetacean phylogeny. Ko, Y. J., Yang, E. C., Lee, J. H., Lee, K. W., Jeong, J. Y., Park, K., . . . Yim, H. S. (2015). Genes & Genomics, 37(12), 1061-1071.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/26486310 The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures. Chung, O., Jin, S., Cho, Y. S., Lim, J., Kim, H., Jho, S., . . . Paek, W. K. (2015). Genome Biology, 16, 215.]
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-*[https://www.ncbi.nlm.nih.gov/pubmed/25666347 Genome-wide analysis of DNA methylation before-and after exercise in the thoroughbred horse with MeDIP-Seq. Gim, J. A., Hong, C. P., Kim, D. S., Moon, J. W., Choi, Y., Eo, J., . . . Kim, H. S. (2015). Mol Cells, 38(3), 210-220.]
+[https://www.nature.com/articles/s41398-019-0595-2 Depression and Suicide Risk Prediction Models Using Blood-Derived Multi-Omics Data]&nbsp;[[Depression_and_suicide_risk_prediction_models_using_blood-derived_multi-omics_data.|번역본]]
-*[https://www.ncbi.nlm.nih.gov/pubmed/26653294 Genomic legacy of the African cheetah, Acinonyx jubatus. Dobrynin, P., Liu, S., Tamazian, G., Xiong, Z., Yurchenko, A. A., Krasheninnikova, K., . . . O'Brien, S. J. (2015). Genome Biology, 16, 277.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25637569 HEpD: A database describing epigenetic differences between Thoroughbred and Jeju horses. Gim, J. A., Lee, S., Kim, D. S., Jeong, K. S., Hong, C. P., Bae, J. H., . . . Kim, H. S. (2015a). Gene, 560(1), 83-88.]
-*[https://link.springer.com/article/10.1007/s13258-014-0251-4 HExDB: a database for epigenetic changes occurring after horse exercise. Gim, J. A., Lee, S., Kim, D. S., Jeong, K. S., Hong, C. P., Bae, J. H., . . . Kim, H. S. (2015b). Genes & Genomics, 37(3), 287-294.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25565328 Insights into the Evolution of Longevity from the Bowhead Whale Genome. Keane, M., Semeiks, J., Webb, A. E., Li, Y. I., Quesada, V., Craig, T., . . . de Magalhaes, J. P. (2015). Cell reports, 10(1), 112-122.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25983541 Profiling age-related epigenetic markers of stomach adenocarcinoma in young and old subjects. Kim, B. C., Jeong, H. O., Park, D., Kim, C. H., Lee, E. K., Kim, D. H., . . . Chung, H. Y. (2015). Cancer Inform, 14, 47-54.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25965825 SLC15A2 genomic variation is associated with the extraordinary response of sorafenib treatment: whole-genome analysis in patients with hepatocellular carcinoma. Lee, Y. S., Kim, B. H., Kim, B. C., Shin, A., Kim, J. S., Hong, S. H., . . . Park, J. W. (2015). Oncotarget, 6(18), 16449-16460.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25887915 Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan. Ilyas, M., Kim, J. S., Cooper, J., Shin, Y. A., Kim, H. M., Cho, Y. S., . . . Bhak, J. (2015). BMC genomics, 16, 172.]
-'''2014'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | Translational Psychiatry
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" |
+[https://pubmed.ncbi.nlm.nih.gov/30825304/ The Draft Genome of an Octocoral, Dendronephthya Gigantea]&nbsp;[[The_Draft_Genome_of_an_Octocoral,_Dendronephthya_gigantea.|번역본]]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25329639 The feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platform. Jeon, Y. J., Zhou, Y., Li, Y., Guo, Q., Chen, J., Quan, S., . . . Bhak, J. (2014). PLoS One, 9(10), e110240.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology and Evolution
-*[https://www.ncbi.nlm.nih.gov/pubmed/25027854 Genome-wide analysis of DNA methylation patterns in horse. Lee, J. R., Hong, C. P., Moon, J. W., Jung, Y. D., Kim, D. S., Kim, T. H., . . . Kim, H. S. (2014). BMC genomics, 15, 598.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/24690483 Genomic profile analysis of diffuse-type gastric cancers. Lee, Y. S., Cho, Y. S., Lee, G. K., Lee, S., Kim, Y. W., Jho, S., . . . Lee, J. S. (2014). Genome Biology, 15(4).]
+| style="text-align: center; vertical-align: middle; height: 50px;" |
-*[https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0093662 Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing. Kim, M. C., Lee, S. W., Ryu, D. Y., Cui, F. J., Bhak, J., & Kim, Y. (2014). PLoS One, 9(4).]
+[https://pubmed.ncbi.nlm.nih.gov/30811993/ The Galleria Mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax]
-*[https://www.ncbi.nlm.nih.gov/pubmed/24270359 Minke whale genome and aquatic adaptation in cetaceans. Yim, H. S., Cho, Y. S., Guang, X., Kang, S. G., Jeong, J. Y., Cha, S. S., . . . Lee, J. H. (2014). Nature Genetics, 46(1), 88-92.]
-<div style="margin-left: 40px;"><&nbsp;[[Minke_whale_genome_and_aquatic_adaptation_in_cetaceans.|번역본]]&nbsp;></div>
-*[https://www.ncbi.nlm.nih.gov/pubmed/25031567 New lung cancer panel for high-throughput targeted resequencing. Kim, E. H., Lee, S., Park, J., Lee, K., Bhak, J., & Kim, B. C. (2014). Genomics Inform, 12(2), 50-57.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/24276243 PPP1R1B-STARD3 chimeric fusion transcript in human gastric cancer promotes tumorigenesis through activation of PI3K/AKT signaling. Yun, S. M., Yoon, K., Lee, S., Kim, E., Kong, S. H., Choe, J., . . . Kim, S. J. (2014). Oncogene, 33(46), 5341-5347.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/24709692 Whole-genome analysis of a patient with early-stage small-cell lung cancer. Han, J. Y., Lee, Y. S., Kim, B. C., Lee, G. K., Lee, S., Kim, E. H., . . . Bhak, J. (2014). Pharmacogenomics J, 14(6), 503-508.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/25521865 Whole genome sequence and analysis of the Marwari horse breed and its genetic origin. Jun, J., Cho, Y. S., Hu, H., Kim, H. M., Jho, S., Gadhvi, P., . . . Bhak, J. (2014). BMC genomics, 15.]
-'''2013'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | Cell Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" |
+[https://pubmed.ncbi.nlm.nih.gov/30925871/ The Genome of the Giant Nomura's Jellyfish Sheds Light on the Early Evolution of Active Predation]&nbsp;[[The_genome_of_the_giant_Nomura's_jellyfish_sheds_light_on_the_early_evolution_of_active_predation.|번역본]]
-*[https://www.ncbi.nlm.nih.gov/pubmed/23737375 Comprehensive genome- and transcriptome-wide analyses of mutations associated with microsatellite instability in Korean gastric cancers. Yoon, K., Lee, S., Han, T. S., Moon, S. Y., Yun, S. M., Kong, S. H., . . . Kim, S. J. (2013). Genome Research, 23(7), 1109-1117.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Biology
-*[https://www.ncbi.nlm.nih.gov/pubmed/23707431 The genetic basis of white tigers. Xu, X., Dong, G. X., Hu, X. S., Miao, L., Zhang, X. L., Zhang, D. L., . . . Luo, S. J. (2013). Current Biology, 23(11), 1031-1035.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/23742982 iAnn: an event sharing platform for the life sciences. Jimenez, R. C., Albar, J. P., Bhak, J., Blatter, M. C., Blicher, T., Brazas, M. D., . . . Corpas, M. (2013). Bioinformatics, 29(15), 1919-1921.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | [https://pubmed.ncbi.nlm.nih.gov/30535859/ Investigation of Hanwoo-specific Structural Variations Using Whole-Genome Sequencing Data]
-*[https://www.ncbi.nlm.nih.gov/pubmed/23580538 Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horse. Kim, H., Lee, T., Park, W., Lee, J. W., Kim, J., Lee, B. Y., . . . Kim, H. (2013). DNA Res, 20(3), 287-298.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genes & Genomics
-*[https://www.ncbi.nlm.nih.gov/pubmed/24045858 The tiger genome and comparative analysis with lion and snow leopard genomes. Cho, Y. S., Hu, L., Hou, H., Lee, H., Xu, J., Kwon, S., . . . Bhak, J. (2013). Nat Commun, 4, 2433.]
+|-
-<div style="margin-left: 40px;">< [[The_tiger_genome_and_comparative_analysis_with_lion_and_snow_leopard_genomes|번역본]] ></div>
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/31464627/ Raptor Genomes Reveal Evolutionary Signatures of Predatory and Nocturnal Lifestyles]&nbsp;[[Raptor_genomes_reveal_evolutionary_signatures_of_predatory_and_nocturnal_lifestyles.|번역본]]
-*[https://www.nature.com/articles/srep02998 Whole genome comparison of donor and cloned dogs. Kim, H. M., Cho, Y. S., Kim, H., Jho, S., Son, B., Choi, J. Y., . . . Jang, G. (2013). Scientific reports, 3.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29432975/ Sequencing and Analysis of the Whole Genome of Indian Gujarati Male]&nbsp;[[Sequencing_and_analysis_of_the_whole_genome_of_Indian_Gujarati_male.|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2012'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2018
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29644394/ Genomic Analysis Reveals Secondary Glioblastoma After Radiotherapy in a Subset of Recurrent Medulloblastomas]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Acta Neuropathologica
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29383489/ Genomic Structure of the Native Inhabitants of Peninsular Malaysia and North Borneo Suggests Complex Human Population History in Southeast Asia]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Human Genetics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/30475813/ Grading System for Periodontitis by Analyzing Levels of Periodontal Pathogens in Saliva]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29618732/ KoVariome: Korean National Standard Reference Variome Database of Whole Genomes With Comprehensive SNV, Indel, CNV, and SV Analyses]&nbsp;[[KoVariome:_Korean_National_Standard_Reference_Variome_database_of_whole_genomes_with_comprehensive_SNV,_indel,_CNV,_and_SV_analyses.|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Scientific Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/30320564/ Magnetocardiography Scoring System to Predict the Presence of Obstructive Coronary Artery Disease]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Clinical Hemorheology and Microcirculation
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29775755/ Whole Genome Sequencing and Bioinformatics Analysis of Two Egyptian Genomes]&nbsp;[[Whole_genome_sequencing_and_bioinformatics_analysis_of_two_Egyptian_genomes|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Gene
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/22580955 De novo transcriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesis. Hyun, T. K., Rim, Y., Jang, H. J., Kim, C. H., Park, J., Kumar, R., . . . Kim, J. Y. (2012). Plant Mol Biol, 79(4-5), 413-427.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.pnas.org/content/109/12/4574.short Genetic dating indicates that the Asian-Papuan admixture through Eastern Indonesia corresponds to the Austronesian expansion. Xu, S. H., Pugach, I., Stoneking, M., Kayser, M., Jin, L., & Consortium, H. P.-A. S. (2012). Proceedings of the National Academy of Sciences of the United States of America, 109(12), 4574-4579.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/24627758 Low budget analysis of Direct-To-Consumer genomic testing familial data. Glusman, G., Cariaso, M., Jimenez, R., Swan, D., Greshake, B., Bhak, J., . . . Corpas, M. (2012). F1000Res, 1, 3.]
+| colspan="1" rowspan="5" style="text-align: center; vertical-align: middle; height: 50px;" | 2017<br/> <br/> <br/> <br/> &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/22139927 MetaBase--the wiki-database of biological databases. Bolser, D. M., Chibon, P. Y., Palopoli, N., Gong, S., Jacob, D., Del Angel, V. D., . . . Bhak, J. (2012). Nucleic Acids Res, 40(Database issue), D1250-1254.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28074842/ Analysis of the FGF Gene Family Provides Insights Into Aquatic Adaptation in Cetaceans]
-*[https://www.ncbi.nlm.nih.gov/pubmed/22797899 A public resource facilitating clinical use of genomes. Ball, M. P., Thakuria, J. V., Zaranek, A. W., Clegg, T., Rosenbaum, A. M., Wu, X. D., . . . Church, G. M. (2012). Proceedings of the National Academy of Sciences of the United States of America, 109(30), 11920-11927.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Scientific Reports
-*[https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-13-473 Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq. Park, K. D., Park, J., Ko, J., Kim, B. C., Kim, H. S., Ahn, K., . . . Cho, B. W. (2012). BMC genomics, 13.]
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28991236/ Corrigendum: An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes]&nbsp;[[An_ethnically_relevant_consensus_Korean_reference_genome_is_a_step_towards_personal_reference_genomes.|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nature Communications
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28164156/ Genome-wide Data From Two Early Neolithic East Asian Individuals Dating to 7700 Years Ago]&nbsp;[[Genome-wide_data_from_two_early_Neolithic_East_Asian_individuals_dating_to_7700_years_ago._Siska,_V.,_Jones,_E._R.,_Jeon,_S.,_Bhak,_Y.,_Kim,_H._M.,_Cho,_Y._S.,_._._._Manica,_A._(2017)._Sci_Adv,_3(2),_e1601877|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | ScienceAdvances
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28678835/ Myotis Rufoniger Genome Sequence and Analyses: M. Rufoniger's Genomic Feature and the Decreasing Effective Population Size of Myotis Bats]&nbsp;[[Myotis_rufoniger_genome_sequence_and_analyses|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28042784/ Perspectives Provided by Leopard and Other Cat Genomes: How Diet Determined the Evolutionary History of Carnivores, Omnivores, and Herbivores]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMB Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2011'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="8" style="text-align: center; vertical-align: middle; height: 50px;" | 2016
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27716407/ An Adaptive Detection Method for Fetal Chromosomal Aneuploidy Using Cell-Free DNA From 447 Korean Women]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Medical Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27802837/ Comparison of Carnivore, Omnivore, and Herbivore Mammalian Genomes With a New Leopard Assembly]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27129388/ Comparison of Two High-Throughput Semiconductor Chip Sequencing Platforms in Noninvasive Prenatal Testing for Down Syndrome in Early Pregnancy]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Medical Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
+[https://pubmed.ncbi.nlm.nih.gov/27882922/ An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes]
-*[https://www.ncbi.nlm.nih.gov/pubmed/21696235 BetaDock: shape-priority docking method based on beta-complex. Kim, D. S., Kim, C. M., Won, C. I., Kim, J. K., Ryu, J., Cho, Y., . . . Bhak, J. (2011). J Biomol Struct Dyn, 29(1), 219-242.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nature Communications
-*[https://www.ncbi.nlm.nih.gov/pubmed/21765942 Gene expression pattern in transmitochondrial cytoplasmic hybrid cells harboring type 2 diabetes-associated mitochondrial DNA haplogroups. Hwang, S., Kwak, S. H., Bhak, J., Kang, H. S., Lee, Y. R., Koo, B. K., . . . Cho, Y. M. (2011). PLoS One, 6(7), e22116.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/22242128 Identification of close relatives in the HUGO Pan-Asian SNP database. Yang, X., Xu, S., Consortium, H. P.-A. S., & Indian Genome Variation, C. (2011). PLoS One, 6(12), e29502.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;[https://pubmed.ncbi.nlm.nih.gov/27502179/ The Genetics of an Early Neolithic Pastoralist From the Zagros, Iran]
-*[https://www.ncbi.nlm.nih.gov/pubmed/22369201 Liverome: a curated database of liver cancer-related gene signatures with self-contained context information. Lee, L., Wang, K., Li, G., Xie, Z., Wang, Y., Xu, J., . . . Hwang, S. (2011). BMC genomics, 12 Suppl 3, S3.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Scientific Reports
-*[https://www.ncbi.nlm.nih.gov/pubmed/21334307 Mutational hotspots in the mitochondrial genome of lung cancer. Choi, S. J., Kim, S. H., Kang, H. Y., Lee, J., Bhak, J. H., Sohn, I., . . . Kim, J. (2011). Biochem Biophys Res Commun, 407(1), 23-27.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/21731755 PanSNPdb: the Pan-Asian SNP genotyping database. Ngamphiw, C., Assawamakin, A., Xu, S., Shaw, P. J., Yang, J. O., Ghang, H., . . . Consortium, H. P.-A. S. (2011). PLoS One, 6(6), e21451.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/28004835/ Genomes of Coral Dinoflagellate Symbionts Highlight Evolutionary Adaptations Conducive to a Symbiotic Lifestyle]
-*[https://www.ncbi.nlm.nih.gov/pubmed/21483678 Population genetic structure of peninsular Malaysia Malay sub-ethnic groups. Hatin, W. I., Nur-Shafawati, A. R., Zahri, M. K., Xu, S., Jin, L., Tan, S. G., . . . Consortium, H. P.-A. S. (2011). PLoS One, 6(4), e18312.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Scientific Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27153548/ RNA-Seq Analysis Reveals New Evidence for Inflammation-Related Changes in Aged Kidney]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Oncotarget
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27561685/ Short-term Calorie Restriction Ameliorates Genomewide, Age-Related Alterations in DNA Methylation]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Aging Cell
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2010'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="11" style="text-align: center; vertical-align: middle; height: 50px;" | 2015
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26449472/ Ancient Ethiopian Genome Reveals Extensive Eurasian Admixture Throughout the African Continent]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s13258-015-0353-7 Characterization of cetacean Numt and its application into cetacean phylogeny]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genes & Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26486310/ The First Whole Genome and Transcriptome of the Cinereous Vulture Reveals Adaptation in the Gastric and Immune Defense Systems and Possible Convergent Evolution Between the Old and New World Vultures]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25666347/ Genome-wide Analysis of DNA Methylation Before-And After Exercise in the Thoroughbred Horse With MeDIP-Seq]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Molecules and Cells
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26653294/ Genomic Legacy of the African Cheetah, Acinonyx Jubatus]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25637569/ HEpD: A Database Describing Epigenetic Differences Between Thoroughbred and Jeju Horses]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Gene
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s13258-014-0251-4 HExDB: a database for epigenetic changes occurring after horse exercise]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genes & Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25565328/ Insights Into the Evolution of Longevity From the Bowhead Whale Genome]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Cell Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25983541/ Profiling Age-Related Epigenetic Markers of Stomach Adenocarcinoma in Young and Old Subjects]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Cancer Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25965825/ SLC15A2 Genomic Variation Is Associated With the Extraordinary Response of Sorafenib Treatment: Whole-Genome Analysis in Patients With Hepatocellular Carcinoma]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Oncotarget
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25887915/ Whole Genome Sequencing of an Ethnic Pathan (Pakhtun) From the North-West of Pakistan]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/19418260 Alpha-glucosidase folding during urea denaturation: enzyme kinetics and computational prediction. Wu, X. Q., Wang, J., Lu, Z. R., Tang, H. M., Park, D., Oh, S. H., . . . Zou, F. (2010). Appl Biochem Biotechnol, 160(5), 1341-1355.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/20536287 Differential evolutionary rates of neuronal transcriptome in Aplysia kurodai and Aplysia californica as a tool for gene mining. Choi, S. L., Lee, Y. S., Rim, Y. S., Kim, T. H., Moroz, L. L., Kandel, E. R., . . . Kaang, B. K. (2010). J Neurogenet, 24(2), 75-82.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19701810 The effect of trifluoroethanol on tyrosinase activity and conformation: inhibition kinetics and computational simulations. Lu, Z. R., Shi, L., Wang, J., Park, D., Bhak, J., Yang, J. M., . . . Zou, F. (2010). Appl Biochem Biotechnol, 160(7), 1896-1908.]
+| colspan="1" rowspan="10" style="text-align: center; vertical-align: middle; height: 50px;" | 2014
-*[https://www.ncbi.nlm.nih.gov/pubmed/20686617 Gene flow between the Korean peninsula and its neighboring countries. Jung, J., Kang, H., Cho, Y. S., Oh, J. H., Ryu, M. H., Chung, H. W., . . . Kim, H. L. (2010). PLoS One, 5(7), e11855.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25329639/ The Feasibility Study of Non-Invasive Fetal Trisomy 18 and 21 Detection With Semiconductor Sequencing Platform]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19277488 Kinetics of Zn(2+)-induced brain type creatine kinase unfolding and aggregation. Mu, H., Lu, Z. R., Park, D., Kim, B. C., Bhak, J., Zou, F., . . . Zhou, H. M. (2010). Appl Biochem Biotechnol, 160(5), 1309-1320.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
-*[https://www.ncbi.nlm.nih.gov/pubmed/20624717 PDBWiki: added value through community annotation of the Protein Data Bank. Stehr, H., Duarte, J. M., Lappe, M., Bhak, J., & Bolser, D. M. (2010). Database (Oxford), 2010, baq009.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/20645659 A proposal for the revision of molecular boundary typology. Kim, D. S., Won, C. I., & Bhak, J. (2010). J Biomol Struct Dyn, 28(2), 277-288.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25027854/ Genome-wide Analysis of DNA Methylation Patterns in Horse]
-*[https://www.ncbi.nlm.nih.gov/pubmed/20875130 Protein network prediction and topological analysis in Leishmania major as a tool for drug target selection. Florez, A. F., Park, D., Bhak, J., Kim, B. C., Kuchinsky, A., Morris, J. H., . . . Muskus, C. (2010). BMC Bioinformatics, 11, 484.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
-*[https://www.ncbi.nlm.nih.gov/pubmed/20129805 Sphericity of a protein via the beta-complex. Kim, D. S., Kim, J. K., Won, C. I., Kim, C. M., Park, J. Y., & Bhak, J. (2010). J Mol Graph Model, 28(7), 636-649.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19082922 Structural analysis and inhibitory kinetics of brain type creatine kinase by sodium dodecyl sulfate. Lu, Z. R., Oh, S. H., Zhou, S. S., Zou, H. C., Park, D., Park, S. J., . . . Zou, F. (2010). Appl Biochem Biotechnol, 160(3), 831-842.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24690483/ Genomic Profile Analysis of Diffuse-Type Gastric Cancers]
-*[https://www.ncbi.nlm.nih.gov/pubmed/20004400 Systematic cyanobacterial membrane proteome analysis by combining acid hydrolysis and digestive enzymes with nano-liquid chromatography-Fourier transform mass spectrometry. Kwon, J., Oh, J., Park, C., Cho, K., Kim, S. I., Kim, S., . . . Choi, J. S. (2010). J Chromatogr A, 1217(3), 285-293.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Biology
-*[https://www.ncbi.nlm.nih.gov/pubmed/21131573 Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome. Kim, M. Y., Lee, S., Van, K., Kim, T. H., Jeong, S. C., Choi, I. Y., . . . Lee, S. H. (2010). Proc Natl Acad Sci U S A, 107(51), 22032-22037.]
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0093662 Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24270359/ Minke Whale Genome and Aquatic Adaptation in Cetaceans]&nbsp;[[Minke_whale_genome_and_aquatic_adaptation_in_cetaceans.|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nature Genetics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25031567/ New Lung Cancer Panel for High-Throughput Targeted Resequencing]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24276243/ PPP1R1B-STARD3 Chimeric Fusion Transcript in Human Gastric Cancer Promotes Tumorigenesis Through Activation of PI3K/AKT Signaling]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Oncogene
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24709692/ Whole-genome Analysis of a Patient With Early-Stage Small-Cell Lung Cancer]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Pharmacogenomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23737375/ Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/25521865/" | [https://pubmed.ncbi.nlm.nih.gov/25521865/ Whole Genome Sequence and Analysis of the Marwari Horse Breed and Its Genetic Origin]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2009'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2013
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23737375/ Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23707431/ The Genetic Basis of White Tigers]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Current Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23742982/ iAnn: An Event Sharing Platform for the Life Sciences]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23580538/ Peeling Back the Evolutionary Layers of Molecular Mechanisms Responsive to Exercise-Stress in the Skeletal Muscle of the Racing Horse]&nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px;" | DNA Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24045858/ The Tiger Genome and Comparative Analysis With Lion and Snow Leopard Genomes]&nbsp;[[The_tiger_genome_and_comparative_analysis_with_lion_and_snow_leopard_genomes|번역본]]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nature Communications
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.nature.com/articles/srep02998 Whole genome comparison of donor and cloned dogs]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Scientific Reports
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958506 BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources. Lim, J., Kim, S. Y., Kim, S., Eo, H. S., Kim, C. B., Paek, W. K., . . . Bhak, J. (2009). BMC genomics, 10 Suppl 3, S8.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958500 COMUS: Clinician-Oriented locus-specific MUtation detection and deposition System. Jho, S., Kim, B. C., Ghang, H., Kim, J. H., Park, D., Kim, H. M., . . . Bhak, J. (2009). BMC genomics, 10 Suppl 3, S35.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19443183 DNA microarray analyses and interactomic predictions for atopic dermatitis. Lu, Z. R., Kim, W. S., Cho, I. H., Park, D., Bhak, J., Shi, L., . . . Zou, F. (2009). J Dermatol Sci, 55(2), 123-125.]
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2012
-*[https://www.ncbi.nlm.nih.gov/pubmed/18824329 Dysregulated genes of extrinsic type of atopic dermatitis: 34K microarray and interactomic analyses. Lu, Z. R., Park, T. H., Lee, E. S., Kim, K. J., Park, D., Kim, B. C., . . . Yang, J. M. (2009). J Dermatol Sci, 53(2), 146-150.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22580955/ De Novo Transcriptome Sequencing of Momordica Cochinchinensis to Identify Genes Involved in the Carotenoid Biosynthesis]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19061912 The effects of acrylamide on brain creatine kinase: inhibition kinetics and computational docking simulation. Lu, Z. R., Zou, H. C., Park, S. J., Park, D., Shi, L., Oh, S. H., . . . Zou, F. (2009). Int J Biol Macromol, 44(2), 128-132.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Plant Molecular Biology
-*[https://www.ncbi.nlm.nih.gov/pubmed/19470904 The first Korean genome sequence and analysis: full genome sequencing for a socio-ethnic group. Ahn, S. M., Kim, T. H., Lee, S., Kim, D., Ghang, H., Kim, D. S., . . . Kim, S. J. (2009). Genome Res, 19(9), 1622-1629.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958513 Gevab: a prototype genome variation analysis browsing server. Kim, W. Y., Kim, S. Y., Kim, T. H., Ahn, S. M., Byun, H. N., Kim, D., . . . Bhak, J. (2009). BMC Bioinformatics, 10 Suppl 15, S3.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.pnas.org/content/109/12/4574.short Genetic dating indicates that the Asian–Papuan admixture through Eastern Indonesia corresponds to the Austronesian expansion]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958510 The Korean Bird Information System (KBIS) through open and public participation. Paik, I. H., Lim, J., Chun, B. S., Jin, S. D., Yu, J. P., Lee, J. W., . . . Paek, W. K. (2009). BMC Bioinformatics, 10 Suppl 15, S11.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PNAS
-*[https://www.ncbi.nlm.nih.gov/pubmed/20007900 Mapping human genetic diversity in Asia. Consortium, H. P.-A. S., Abdulla, M. A., Ahmed, I., Assawamakin, A., Bhak, J., Brahmachari, S. K., . . . Indian Genome Variation, C. (2009). Science, 326(5959), 1541-1545.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958484 MitoInteractome: mitochondrial protein interactome database, and its application in 'aging network' analysis. Reja, R., Venkatakrishnan, A. J., Lee, J., Kim, B. C., Ryu, J. W., Gong, S., . . . Park, D. (2009). BMC genomics, 10 Suppl 3, S20.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24627758/ Low Budget Analysis of Direct-To-Consumer Genomic Testing Familial Data]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958475 MitoVariome: a variome database of human mitochondrial DNA. Lee, Y. S., Kim, W. Y., Ji, M., Kim, J. H., & Bhak, J. (2009). BMC genomics, 10 Suppl 3, S12.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | F1000Research
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958497 PDbase: a database of Parkinson's disease-related genes and genetic variation using substantia nigra ESTs. Yang, J. O., Kim, W. Y., Jeong, S. Y., Oh, J. H., Jho, S., Bhak, J., & Kim, N. S. (2009). BMC genomics, 10 Suppl 3, S32.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19306394 Planning the human variome project: the Spain report. Kaput, J., Cotton, R. G., Hardman, L., Watson, M., Al Aqeel, A. I., Al-Aama, J. Y., . . . Contributors to the Human Variome Project Planning, M. (2009). Human Mutation, 30(4), 496-510.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22139927/ MetaBase--the Wiki-Database of Biological Databases]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19157793 Profiling the dysregulated genes of keratinocytes in atopic dermatitis patients: cDNA microarray and interactomic analyses. Lu, Z. R., Park, D., Lee, K. A., Ryu, J. W., Bhak, J., Shi, L., . . . Yang, J. M. (2009). J Dermatol Sci, 54(2), 126-129.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nucleic Acids Research
-*[https://www.ncbi.nlm.nih.gov/pubmed/19958481 PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440. Park, S. J., Choi, J. S., Kim, B. C., Jho, S. W., Ryu, J. W., Park, D., . . . Kim, S. I. (2009). BMC genomics, 10 Suppl 3, S18.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19760752 ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database. Yang, J. O., Kim, W. Y., & Bhak, J. (2009). Human Mutation, 30(12), E1010-1020.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22797899/ A Public Resource Facilitating Clinical Use of Genomes]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19721878 Transcriptome and protein domain analyses in Aplysia nervous system with evolutionary implications. Lee, Y. S., Kim, T. H., Choi, S. L., Lee, S., Bhak, J., & Kaang, B. K. (2009). Commun Integr Biol, 2(4), 321-323.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PNAS
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-13-473 Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2008'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="7" style="text-align: center; vertical-align: middle; height: 50px;" | 2011
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21696235/ BetaDock: Shape-Priority Docking Method Based on Beta-Complex]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Biomolecular Structure and Dynamics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21765942/ Gene Expression Pattern in Transmitochondrial Cytoplasmic Hybrid Cells Harboring Type 2 Diabetes-Associated Mitochondrial DNA Haplogroups]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22242128/ Identification of Close Relatives in the HUGO Pan-Asian SNP Database]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22369201/ Liverome: A Curated Database of Liver Cancer-Related Gene Signatures With Self-Contained Context Information]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21334307/ Mutational Hotspots in the Mitochondrial Genome of Lung Cancer]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Biochemical and Biophysical Research Communications
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21731755/ PanSNPdb: The Pan-Asian SNP Genotyping Database]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21483678/ Population Genetic Structure of Peninsular Malaysia Malay Sub-Ethnic Groups]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/18037613 Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countries. Sangket, U., Phongdara, A., Chotigeat, W., Nathan, D., Kim, W. Y., Bhak, J., . . . Tan, T. W. (2008). Bioinformatics, 24(2), 299-301.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/18604500 Cyanobacterial hybrid kinase Sll0043 regulates phototaxis by suppressing pilin and twitching motility protein. Shin, B. J., Oh, J., Kang, S., Chung, Y. H., Park, Y. M., Kim, Y. H., . . . Choi, J. S. (2008). J Microbiol, 46(3), 300-308.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/18808205 The effect of histidine residue modification on tyrosinase activity and conformation: inhibition kinetics and computational prediction. Guo, L., Lu, Z. R., Park, D., Oh, S. H., Shi, L., Park, S. J., . . . Zou, F. (2008). J Biomol Struct Dyn, 26(3), 395-402.]
+| colspan="1" rowspan="12" style="text-align: center; vertical-align: middle; height: 50px;" | 2010
-*[https://link.springer.com/article/10.1007/s12257-007-0183-9 Identification of gene-related Korean patents and construction of a database server for Korean patent sequences. Lee, B., Kim, S.-K., Kim, T., Kim, S. S., Ryu, G. C., & Bhak, J. (2008). Biotechnology and Bioprocess Engineering, 13(2), 248.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19418260/ Alpha-glucosidase Folding During Urea Denaturation: Enzyme Kinetics and Computational Prediction]
-*[https://www.ncbi.nlm.nih.gov/pubmed/19091018 An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases. Yang, J. O., Hwang, S., Oh, J., Bhak, J., & Sohn, T. K. (2008). BMC Bioinformatics, 9 Suppl 12, S19.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Applied Biochemistry and Biotechnology
-*[https://www.ncbi.nlm.nih.gov/pubmed/19091024 An integrated Korean biodiversity and genetic information retrieval system. Lim, J., Bhak, J., Oh, H. M., Kim, C. B., Park, Y. H., & Paek, W. K. (2008). BMC Bioinformatics, 9 Suppl 12, S24.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/18448467 MassNet: a functional annotation service for protein mass spectrometry data. Park, D., Kim, B. C., Cho, S. W., Park, S. J., Choi, J. S., Kim, S. I., . . . Lee, S. (2008). Nucleic Acids Res, 36(Web Server issue), W491-495.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20536287/ Differential Evolutionary Rates of Neuronal Transcriptome in Aplysia Kurodai and Aplysia Californica as a Tool for Gene Mining]
-*[http://www.koreascience.or.kr/article/JAKO200806135606418.page Personal genomics, bioinformatics, and variomics. Bhak, J., Ghang, H., Reja, R., & Kim, S.-S. (2008). Genomics & Informatics, 6(4), 161-165.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Neurogenetics
-*[https://www.ncbi.nlm.nih.gov/pubmed/18023220 Pocket extraction on proteins via the Voronoi diagram of spheres. Kim, D., Cho, C. H., Cho, Y., Ryu, J., Bhak, J., & Kim, D. S. (2008). J Mol Graph Model, 26(7), 1104-1112.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/18215330 Predicting the interactome of Xanthomonas oryzae pathovar oryzae for target selection and DB service. Kim, J. G., Park, D., Kim, B. C., Cho, S. W., Kim, Y. T., Park, Y. J., . . . Bhak, J. (2008). BMC Bioinformatics, 9, 41.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19701810/ The Effect of Trifluoroethanol on Tyrosinase Activity and Conformation: Inhibition Kinetics and Computational Simulations]
-*[https://www.ncbi.nlm.nih.gov/pubmed/18948079 Prediction and evaluation of protein-protein interaction in keratinocyte differentiation. Yoon, H. K., Sohn, K. C., Lee, J. S., Kim, Y. J., Bhak, J., Yang, J. M., . . . Lee, J. H. (2008). Biochem Biophys Res Commun, 377(2), 662-667.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Applied Biochemistry and Biotechnology
-*[https://www.ncbi.nlm.nih.gov/pubmed/21136834 Proteomic approaches to the analysis of atopic dermatitis and new insights from interactomics. Park, Y. D., Park, D., Bhak, J., & Yang, J. M. (2008). Proteomics Clin Appl, 2(3), 290-300.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/18315851 SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions. Kim, B. C., Kim, W. Y., Park, D., Chung, W. H., Shin, K. S., & Bhak, J. (2008). BMC Bioinformatics, 9 Suppl 1, S2.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20686617/ Gene Flow Between the Korean Peninsula and Its Neighboring Countries]
-*[http://www.koreascience.or.kr/article/JAKO200831235453829.page Structural Bioinformatics Analysis of Disease-related Mutations. Park, S.-J., Oh, S.-H., Park, D.-U., & Bhak, J. (2008). Genomics & Informatics, 6(3), 142-146.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PLoS One
-*[https://www.ncbi.nlm.nih.gov/pubmed/18315852 SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803. Kim, W. Y., Kang, S., Kim, B. C., Oh, J., Cho, S., Bhak, J., & Choi, J. S. (2008). BMC Bioinformatics, 9 Suppl 1, S20.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/19017802 Transcriptome analysis and identification of regulators for long-term plasticity in Aplysia kurodai. Lee, Y. S., Choi, S. L., Kim, T. H., Lee, J. A., Kim, H. K., Kim, H., . . . Kaang, B. K. (2008). Proc Natl Acad Sci U S A, 105(47), 18602-18607.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19277488/ Kinetics of Zn(2+)-induced Brain Type Creatine Kinase Unfolding and Aggregation]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Applied Biochemistry and Biotechnology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20624717/ PDBWiki: Added Value Through Community Annotation of the Protein Data Bank]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Database
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20645659/ A Proposal for the Revision of Molecular Boundary Typology]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Biomolecular Structure and Dynamics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20875130/ Protein Network Prediction and Topological Analysis in Leishmania Major as a Tool for Drug Target Selection]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20129805/ Sphericity of a Protein via the Beta-Complex]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Molecular Graphs and Modelling
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19082922/ Structural Analysis and Inhibitory Kinetics of Brain Type Creatine Kinase by Sodium Dodecyl Sulfate]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Applied Biochemistry and Biotechnology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/20004400/" | [https://pubmed.ncbi.nlm.nih.gov/20004400/ Systematic Cyanobacterial Membrane Proteome Analysis by Combining Acid Hydrolysis and Digestive Enzymes With Nano-Liquid chromatography-Fourier Transform Mass Spectrometry]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Chromatography A
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21131573/ Whole-genome Sequencing and Intensive Analysis of the Undomesticated Soybean (Glycine Soja Sieb. And Zucc.) Genome]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PNAS
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2007'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="17" style="text-align: center; vertical-align: middle; height: 50px;" | 2009
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958506/ BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958500/ COMUS: Clinician-Oriented locus-specific MUtation detection and deposition System]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19443183/ DNA microarray analyses and interactomic predictions for atopic dermatitis]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Dermatological Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18824329/ Dysregulated genes of extrinsic type of atopic dermatitis: 34K microarray and interactomic analyses]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Dermatological Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19061912/ The effects of acrylamide on brain creatine kinase: inhibition kinetics and computational docking simulation]
+| style="text-align: center; vertical-align: middle; height: 50px;" | International Journal of Biological Macromolecules
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19470904/ The first Korean genome sequence and analysis: full genome sequencing for a socio-ethnic group]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958513/ Gevab: a prototype genome variation analysis browsing server]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958510/ The Korean Bird Information System (KBIS) through open and public participation]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20007900/ Mapping human genetic diversity in Asia]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958484/ MitoInteractome: mitochondrial protein interactome database, and its application in 'aging network' analysis]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958475/ MitoVariome: a variome database of human mitochondrial DNA]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
+[https://pubmed.ncbi.nlm.nih.gov/19958497/ PDbase: a database of Parkinson's disease-related genes and genetic variation using substantia nigra ESTs] &nbsp;
-*[http://www.koreascience.or.kr/article/JAKO200709906195530.page Biological Object Downloader (BOD) Service for Easy Download and Management of Biological Databases. Park, D.-U., Lee, J.-W., Yoon, G.-S., Gong, S.-S., & Bhak, J. (2007). Genomics & Informatics, 5(4), 196-199.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
-*[https://www.ncbi.nlm.nih.gov/pubmed/17977885 CONSORF: a consensus prediction system for prokaryotic coding sequences. Kang, S., Yang, S. J., Kim, S., & Bhak, J. (2007). Bioinformatics, 23(22), 3088-3090.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/17646709 Genomic distribution of simple sequence repeats in Brassica rapa. Hong, C. P., Piao, Z. Y., Kang, T. W., Batley, J., Yang, T. J., Hur, Y. K., . . . Lim, Y. P. (2007). Mol Cells, 23(3), 349-356.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;[https://pubmed.ncbi.nlm.nih.gov/19306394/ Planning the human variome project: the Spain report]
-*[https://www.ncbi.nlm.nih.gov/pubmed/18305828 GS2PATH: a web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data. Yang, J. O., Charny, P., Lee, B., Kim, S., Bhak, J., & Woo, H. G. (2007). Bioinformation, 2(5), 194-196.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Human Mutation
-*[https://www.ncbi.nlm.nih.gov/pubmed/17057246 Impact of transcriptional properties on essentiality and evolutionary rate. Choi, J. K., Kim, S. C., Seo, J., Kim, S., & Bhak, J. (2007). Genetics, 175(1), 199-206.]
+|-
-*[https://link.springer.com/chapter/10.1007/978-3-540-74477-1_59 Multi-resolution protein model.Kim, D.-S., Lee, B., Won, C.-I., Kim, D., Ryu, J., Cho, Y., . . . Bhak, J. (2007). Paper presented at the International Conference on Computational Science and Its Applications.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19157793/ Profiling the dysregulated genes of keratinocytes in atopic dermatitis patients: cDNA microarray and interactomic analyses]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Dermatological Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958481/ PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19760752/ ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Human Mutation
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19721878/ Transcriptome and protein domain analyses in Aplysia nervous system with evolutionary implications]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Communicative & Integrative Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2006'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="16" style="text-align: center; vertical-align: middle; height: 50px;" | 2008
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18037613/ Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countrie]s
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18604500/ Cyanobacterial hybrid kinase Sll0043 regulates phototaxis by suppressing pilin and twitching motility protein]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Microbiology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18808205/ The effect of histidine residue modification on tyrosinase activity and conformation: inhibition kinetics and computational prediction]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Biomolecular Structure and Dynamics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s12257-007-0183-9 Identification of gene-related Korean patents and construction of a database server for Korean patent sequences]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Biotechnology and Bioprocess Engineering
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19091018/ An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19091024/ An integrated Korean biodiversity and genetic information retrieval system]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18448467/ MassNet: a functional annotation service for protein mass spectrometry data]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nucleic Acids Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="http://www.koreascience.or.kr/article/JAKO200806135606418.page" | [http://www.koreascience.or.kr/article/JAKO200806135606418.page Personal Genomics, Bioinformatics, and Variomics]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18023220/ Pocket extraction on proteins via the Voronoi diagram of spheres]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Molecular Graphs and Modelling
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18215330/ Predicting the interactome of Xanthomonas oryzae pathovar oryzae for target selection and DB service]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18948079/ Prediction and evaluation of protein-protein interaction in keratinocyte differentiation]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Biochemical and Biophysical Research Communications
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21136834/ Proteomic approaches to the analysis of atopic dermatitis and new insights from interactomics]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Proteomics - Clinical Applications
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18315851/ SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200831235453829.page Structural Bioinformatics Analysis of Disease-related Mutations]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18315852/ SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19017802/ Transcriptome analysis and identification of regulators for long-term plasticity in Aplysia kurodai]
+| style="text-align: center; vertical-align: middle; height: 50px;" | PNAS
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[http://www.koreascience.or.kr/article/JAKO200634741684826.page BioCC: an openfree hypertext bio community cluster for biology. Gong, S.-S., Kim, T.-H., Oh, J.-S., Kwon, J.-K., Cho, S.-A., Bolser, D., & Bhak, J. (2006). Genomics & Informatics, 4(3), 125-128.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/15979829 Developmental rate and ploidy of embryos produced by nuclear transfer with different activation treatments in cattle. Bhak, J. S., Lee, S. L., Ock, S. A., Mohana Kumar, B., Choe, S. Y., & Rho, G. J. (2006). Anim Reprod Sci, 92(1-2), 37-49.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/16682823 Functional annotation and analysis of Korean patented biological sequences using bioinformatics. Lee, B. W., Kim, T. H., Kim, S. K., Kim, S. S., Ryu, G. C., & Bhak, J. (2006). Mol Cells, 21(2), 269-275.]
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2007
-*[https://www.ncbi.nlm.nih.gov/pubmed/16845118 Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain information. Lee, S., Lee, B., Jang, I., Kim, S., & Bhak, J. (2006). Nucleic Acids Res, 34(Web Server issue), W99-103.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200709906195530.page Biological Object Downloader (BOD) Service for Easy Download and Management of Biological Databases]
-*[https://link.springer.com/article/10.1631/jzus.2006.A1492 Parameter selection of pocket extraction algorithm using interaction interface. Kim, C.-M., Won, C.-I., Ryu, J., Cho, C.-H., Bhak, J., & Kim, D.-S. (2006). Journal of Zhejiang University-Science A, 7(9), 1492-1499.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genetics & Informatics
-*[https://www.ncbi.nlm.nih.gov/pubmed/16632644 Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa. Yang, T. J., Kim, J. S., Kwon, S. J., Lim, K. B., Choi, B. S., Kim, J. A., . . . Park, B. S. (2006). Plant Cell, 18(6), 1339-1347.]
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17977885/ CONSORF: a consensus prediction system for prokaryotic coding sequences]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17646709/ Genomic distribution of simple sequence repeats in Brassica rapa]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Molecules and Cells
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18305828/ GS2PATH: a web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformation
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17057246/ Impact of transcriptional properties on essentiality and evolutionary rate]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genetics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/978-3-540-74477-1_59 Multi-Resolution Protein Model]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Lecture Notes in Computer Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2005'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2006
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200634741684826.page BioCC: An Openfree Hypertext Bio Community Cluster for Biology]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15979829/ Developmental rate and ploidy of embryos produced by nuclear transfer with different activation treatments in cattle]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Animal Reproduction Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16682823/ Functional annotation and analysis of Korean patented biological sequences using bioinformatics]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Molecules and Cells
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/16845118/" | [https://pubmed.ncbi.nlm.nih.gov/16845118/ Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain information]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nucleic Acids Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1631/jzus.2006.A1492 Parameter selection of pocket extraction algorithm using interaction interface]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Zhejiang University - SCIENCE A
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16632644/ Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Plant Cell
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/15613386 Architecture of basic building blocks in protein and domain structural interaction networks. Moon, H. S., Bhak, J., Lee, K. H., & Lee, D. (2005). Bioinformatics, 21(8), 1479-1486.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.koreamed.org/article/0117GNI/2005.3.2.52 BioCovi: A Visualization Service for Comparative Genomics Analysis. Lee, J., Park, D., & Bhak, J. (2005). Genomics Inform, 3(2), 52.]
+|-
-*[http://www.koreascience.or.kr/article/JAKO200507921778146.page BioSubroutine: an Open Web Server for Bioinformatics Algorithms and Subroutines. Lee, J., Kim, H., Lee, W., Chung, D., & Bhak, J. (2005). Genomics & Informatics, 3(1), 35-38.]
+| colspan="1" rowspan="8" style="text-align: center; vertical-align: middle; height: 50px;" | 2005
-*[https://www.ncbi.nlm.nih.gov/pubmed/15914543 Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map). Park, D., Lee, S., Bolser, D., Schroeder, M., Lappe, M., Oh, D., & Bhak, J. (2005). Bioinformatics, 21(15), 3234-3240.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15613386/ Architecture of basic building blocks in protein and domain structural interaction networks]
-*[https://link.springer.com/article/10.1007/BF03167441 Euclidean Voronoi diagrams of 3D spheres and applications to protein structure analysis. Kim, D.-S., Cho, Y., Kim, D., Kim, S., Bhak, J., & Lee, S.-H. (2005). Japan Journal of Industrial and Applied Mathematics, 22(2), 251.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
-*[http://www.koreascience.or.kr/article/JAKO200507921779715.page HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis and predicted human gene number. Park¹, J., Lee¹, M., Kim, T. H., & Bhak, J. (2005). Genomics & Informatics, 3(3), 112-117.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/16122378 A protein domain interaction interface database: InterPare. Gong, S., Park, C., Choi, H., Ko, J., Jang, I., Lee, J., . . . Bhak, J. (2005). BMC Bioinformatics, 6, 207.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://genominfo.org/journal/view.php?number=433 BioCovi: A Visualization Service for Comparative Genomics Analysis]
-*[https://www.ncbi.nlm.nih.gov/pubmed/15749693 PSIbase: a database of Protein Structural Interactome map (PSIMAP). Gong, S., Yoon, G., Jang, I., Bolser, D., Dafas, P., Schroeder, M., . . . Bhak, J. (2005). Bioinformatics, 21(10), 2541-2543.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200507921778146.page BioSubroutine: an Open Web Server for Bioinformatics Algorithms and Subroutines]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15914543/ Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map)]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/BF03167441 Euclidean Voronoi diagrams of 3D spheres and applications to protein structure analysis]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Japan Journal of Industrial and Applied Mathematics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200507921779715.page HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16122378/ A protein domain interaction interface database: InterPare]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15749693/ PSIbase: a database of Protein Structural Interactome map (PSIMAP)]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2004'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2004
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15610565/ The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Genomics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200407921777370.page The Atom of Evolution]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200407921776196.page High Correlation between Alu Elements and the Conversion of 3' UTR of mRNAs Processed Pseudogenes]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15117749/ HPID: the Human Protein Interaction Database]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14764552/ Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP)]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://academic.oup.com/bioinformatics/article/20/10/1486/237030 Using convex hulls to extract interaction interfaces from known structures]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/15610565 The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions. An, H. J., Lee, D., Lee, K. H., & Bhak, J. (2004). BMC genomics, 5(1), 97.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[http://www.koreascience.or.kr/article/JAKO200407921777370.page The Atom of Evolution. Bhak, J., Bolser, D., Park, D., Cho, Y., Yoo, K., Lee, S., . . . Huston, M. (2004). Genomics & Informatics, 2(4), 167-173.]
+|-
-*[http://www.koreascience.or.kr/article/JAKO200407921776196.page High Correlation between Alu Elements and the Conversion of 3'UTR of mRNAs Processed Pseudogenes. An, H. J., Na, D., Lee, D., Lee, K. H., & Bhak, J. (2004). Genomics & Informatics, 2(2), 86-91.]
+| colspan="1" rowspan="6" style="text-align: center; vertical-align: middle; height: 50px;" | 2003
-*[https://www.ncbi.nlm.nih.gov/pubmed/15117749 HPID: the Human Protein Interaction Database. Han, K., Park, B., Kim, H., Hong, J., & Park, J. (2004). Bioinformatics, 20(15), 2466-2470.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200307921773980.page Biological Network Evolution Hypothesis Applied to Protein Structural Interactome]
-*[https://www.ncbi.nlm.nih.gov/pubmed/14764552 Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP). Kim, W. K., Bolser, D. M., & Park, J. H. (2004). Bioinformatics, 20(7), 1138-1150.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
-*[https://academic.oup.com/bioinformatics/article-abstract/20/10/1486/237030 Using convex hulls to extract interaction interfaces from known structures. Dafas, P., Bolser, D., Gomoluch, J., Park, J., & Schroeder, M. (2004). Bioinformatics, 20(10), 1486-1490.]
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200307921773944.page Challenges and New Approaches in Genomics and Bioinformatics]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomics & Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/12625531/ Different activation treatments for successful development of bovine oocytes following intracytoplasmic sperm injection]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Zygote
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/3-540-36175-8_16 Predicting Protein Interactions in Human by Homologous Interactions in Yeast]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Lecture Notes in Computer Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14531933/ Visualisation and graph-theoretic analysis of a large-scale protein structural interactome]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/12538268/ Visualization and analysis of protein interactions]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2003'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="4" style="text-align: center; vertical-align: middle; height: 50px;" | 2002
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/3-540-36151-0_35 InterViewer: Dynamic Visualization of Protein-Protein Interactions]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Lecture Notes in Computer Science
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14571373/ Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genomic Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/13/0/13_0_318/_article/-char/ja/ Protein Interactions in the Whole Human Genome]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC139993/ Sequence similarity between stereocilin and otoancorin points to a unified mechanism for mechanotransduction in the mammalian inner ear]
+| style="text-align: center; vertical-align: middle; height: 50px;" | BMC Cell Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[http://www.koreascience.or.kr/article/JAKO200307921773980.page Biological network evolution hypothesis applied to protein structural interactome. Bolser, D. M., & Park, J. H. (2003). Genomics & Informatics, 1(1), 7-19.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[http://www.koreascience.or.kr/article/JAKO200307921773944.page Challenges and New Approaches in Genomics and Bioinformatics. Park, J. H., & Han, K. S. (2003). Genomics & Informatics, 1(1), 1-6.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/12625531 Different activation treatments for successful development of bovine oocytes following intracytoplasmic sperm injection. Ock, S. A., Bhak, J. S., Balasubramanian, S., Lee, H. J., Choe, S. Y., & Rho, G. J. (2003). Zygote, 11(1), 69-76.]
+| colspan="1" rowspan="7" style="text-align: center; vertical-align: middle; height: 50px;" | 2001
-*[https://link.springer.com/chapter/10.1007/3-540-36175-8_16 Predicting protein interactions in human by homologous interactions in yeast.Kim, H., Park, J., & Han, K. (2003). Paper presented at the Pacific-Asia Conference on Knowledge Discovery and Data Mining.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11791232/ Conservation of protein interaction network in evolution]
-*[https://www.ncbi.nlm.nih.gov/pubmed/14531933 Visualisation and graph-theoretic analysis of a large-scale protein structural interactome. Bolser, D., Dafas, P., Harrington, R., Park, J., & Schroeder, M. (2003). BMC Bioinformatics, 4, 45.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Informatics
-*[https://www.ncbi.nlm.nih.gov/pubmed/12538268 Visualization and analysis of protein interactions. Ju, B. H., Park, B., Park, J. H., & Han, K. (2003). Bioinformatics, 19(2), 317-318.]
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11125048/ A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nucleic Acids Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11473004/ Generating protein interaction maps from incomplete data: application to fold assignment]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_480/_article/-char/ja/ An Integrated Bioinformatic Search Server: Sequences, Structure, Interaction, and Function of Proteins (SSIF) Server]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11273711/ Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Molecular Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11292848/ PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Nucleic Acids Research
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_350/_article/-char/ja/ Protein Classification Comparison Server]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Genome Informatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2002'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" rowspan="5" style="text-align: center; vertical-align: middle; height: 50px;" | 2000
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10980157/ DaliLite workbench for protein structure comparison]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11159309/ Estimating the significance of sequence order in protein secondary structure and prediction]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10842732/ Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10871268/ RSDB: representative protein sequence databases have high information content]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10842730/ Sequence search algorithm assessment and testing toolkit (SAT)]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://link.springer.com/chapter/10.1007/3-540-36151-0_35 InterViewer: Dynamic visualization of protein-protein interactions.Han, K., Ju, B.-H., & Park, J. H. (2002). Paper presented at the International Symposium on Graph Drawing.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/14571373 Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair. Kim, W. K., Park, J., & Suh, J. K. (2002). Genome Inform, 13, 42-50.]
+|-
-*[https://www.jstage.jst.go.jp/article/gi1990/13/0/13_0_318/_article/-char/ja/ Protein Interactions in the Whole Human Genome. Han, K., Park, B., Kim, H., Kim, H.-J., & Park, J. (2002). Genome Informatics, 13, 318-319.]
+| colspan="1" rowspan="3" style="text-align: center; vertical-align: middle; height: 50px;" | 1998
-*[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC139993/ Sequence similarity between stereocilin and otoancorin points to a unified mechanism for mechanotransduction in the mammalian inner ear. Jovine, L., Park, J., & Wassarman, P. M. (2002). BMC cell biology, 3(1), 28.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9545446/ DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Bioinformatics
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.sciencedirect.com/science/article/pii/S0022283698922215#FN1 Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Molecular Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements
+| style="text-align: center; vertical-align: middle; height: 50px;" | PNAS
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-'''2001'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
+| colspan="1" style="text-align: center; vertical-align: middle; height: 50px;" | 1997
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9367767/ Intermediate sequences increase the detection of homology between sequences]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Journal of Molecular Biology
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/11791232 Conservation of protein interaction network in evolution. Park, J., & Bolser, D. (2001). Genome Inform, 12, 135-140.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/11125048 A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3. Dietmann, S., Park, J., Notredame, C., Heger, A., Lappe, M., & Holm, L. (2001). Nucleic Acids Res, 29(1), 55-57.]
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/11473004 Generating protein interaction maps from incomplete data: application to fold assignment. Lappe, M., Park, J., Niggemann, O., & Holm, L. (2001). Bioinformatics, 17 Suppl 1, S149-156.]
+| colspan="1" rowspan="2" style="text-align: center; vertical-align: middle; height: 50px;" | 1996
-*[https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_480/_article/-char/ja/ An Integrated Bioinformatic Search Server: Sequences, Structure, Interaction, and Function of Proteins (SSIF) Server. Lee, J.-H., Koh, I. S., & Park, J. (2001). Genome Informatics, 12, 480-481.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/8772377/ Protein structure prediction: playing the fold]
-*[https://www.ncbi.nlm.nih.gov/pubmed/11273711 Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast. Park, J., Lappe, M., & Teichmann, S. A. (2001). J Mol Biol, 307(3), 929-938.]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Trends in Biochemical Sciences
-*[https://www.ncbi.nlm.nih.gov/pubmed/11292848 PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information. Qian, J., Stenger, B., Wilson, C. A., Lin, J., Jansen, R., Teichmann, S. A., . . . Gerstein, M. (2001). Nucleic Acids Res, 29(8), 1750-1764.]
+|-
-*[https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_350/_article/-char/ja/ Protein classification comparison server. Park, J.-H., Ryu, S.-R., Kim, C., Koh, I. S., & Park, J. (2001). Genome Informatics, 12, 350-351.]
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9079378/ Update on protein structure prediction: results of the 1995 IRBM workshop]
+| style="text-align: center; vertical-align: middle; height: 50px;" | Folding and Design
-'''2000'''
+|-
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/10980157 DaliLite workbench for protein structure comparison. Holm, L., & Park, J. (2000). Bioinformatics, 16(6), 566-567.]
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" |
-*[https://www.ncbi.nlm.nih.gov/pubmed/11159309 Estimating the significance of sequence order in protein secondary structure and prediction. Park, J., Dietmann, S., Heger, A., & Holm, L. (2000). Bioinformatics, 16(11), 978-987.]
+&nbsp;
-*[https://www.ncbi.nlm.nih.gov/pubmed/10842732 Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL. Teichmann, S. A., Chothia, C., Church, G. M., & Park, J. (2000). Bioinformatics, 16(2), 117-124.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/10871268 RSDB: representative protein sequence databases have high information content. Park, J., Holm, L., Heger, A., & Chothia, C. (2000). Bioinformatics, 16(5), 458-464.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/10842730 Sequence search algorithm assessment and testing toolkit (SAT). Park, J., Holm, L., & Chothia, C. (2000). Bioinformatics, 16(2), 104-110.]
-'''1998'''
-*[https://www.ncbi.nlm.nih.gov/pubmed/9545446 DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins. Park, J., & Teichmann, S. A. (1998). Bioinformatics, 14(2), 144-150.]
-*[https://www.sciencedirect.com/science/article/pii/S0022283698922215#FN1 Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods. Park, J., Karplus, K., Barrett, C., Hughey, R., Haussler, D., Hubbard, T., & Chothia, C. (1998). Journal of molecular biology, 284(4), 1201-1210.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/9843945 Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements. Teichmann, S. A., Park, J., & Chothia, C. (1998). Proc Natl Acad Sci U S A, 95(25), 14658-14663.]
-'''1997'''
+| style="text-align: center; vertical-align: middle; height: 50px; background-color: rgb(238, 238, 238);" | &nbsp;
+|-
-*[https://www.ncbi.nlm.nih.gov/pubmed/9367767 Intermediate sequences increase the detection of homology between sequences. Park, J., Teichmann, S. A., Hubbard, T., & Chothia, C. (1997). J Mol Biol, 273(1), 349-354.]
+| colspan="1" style="text-align: center; vertical-align: middle; height: 50px;" | 1995
+| style="text-align: center; vertical-align: middle; height: 50px;" title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/8710832/ Fold recognition and ab initio structure predictions using hidden Markov models and beta-strand pair potentials]
-'''1996'''
+| style="text-align: center; vertical-align: middle; height: 50px;" | Proteins
+|}
-*[https://www.ncbi.nlm.nih.gov/pubmed/8772377 Protein structure prediction: playing the fold. Hubbard, T., Park, J., Lahm, A., Leplae, R., & Tramontano, A. (1996). Trends Biochem Sci, 21(8), 279-281.]
-*[https://www.ncbi.nlm.nih.gov/pubmed/9079378 Update on protein structure prediction: results of the 1995 IRBM workshop. Hubbard, T., & Tramontano, A. (1996). Fold Des, 1(3), R55-63.]
-'''1995'''
-*[https://www.ncbi.nlm.nih.gov/pubmed/8710832 Fold recognition and ab initio structure predictions using hidden Markov models and beta-strand pair potentials. Hubbard, T. J., & Park, J. (1995). Proteins, 23(3), 398-402.]
-&nbsp;